Gene : Potri.005G226100 P. trichocarpa v3.1
Defline:  (1 of 2) K12667 - oligosaccharyltransferase complex subunit delta (ribophorin II) (SWP1, RPN2) Genomic Order:  2356
Name:  ? Potri.005G226100 Secondary Identifier:  ? PAC:37264689
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G226100 0.5kb upstream 0.5kb upstream 8811 true Chr05: 23633972-23642782 Populus trichocarpa
Potri.005G226100 0.5kb upstream 0.5kb upstream 500 false Chr05: 23642283-23642782 Populus trichocarpa
Potri.005G226100 0.5kb downstream 0.5kb downstream 8811 true Chr05: 23633472-23642282 Populus trichocarpa
Potri.005G226100 0.5kb downstream 0.5kb downstream 500 false Chr05: 23633472-23633971 Populus trichocarpa
Potri.005G226100 1.0kb upstream 1.0kb upstream 9311 true Chr05: 23633972-23643282 Populus trichocarpa
Potri.005G226100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 23642283-23643282 Populus trichocarpa
Potri.005G226100 1.0kb downstream 1.0kb downstream 9311 true Chr05: 23632972-23642282 Populus trichocarpa
Potri.005G226100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 23632972-23633971 Populus trichocarpa
Potri.005G226100 2.0kb upstream 2.0kb upstream 10311 true Chr05: 23633972-23644282 Populus trichocarpa
Potri.005G226100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 23642283-23644282 Populus trichocarpa
Potri.005G226100 2.0kb downstream 2.0kb downstream 10311 true Chr05: 23631972-23642282 Populus trichocarpa
Potri.005G226100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 23631972-23633971 Populus trichocarpa
Potri.005G226100 5.0kb upstream 5.0kb upstream 13311 true Chr05: 23633972-23647282 Populus trichocarpa
Potri.005G226100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 23642283-23647282 Populus trichocarpa
Potri.005G226100 5.0kb downstream 5.0kb downstream 13311 true Chr05: 23628972-23642282 Populus trichocarpa
Potri.005G226100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 23628972-23633971 Populus trichocarpa
Potri.005G226100 10.0kb upstream 10.0kb upstream 18311 true Chr05: 23633972-23652282 Populus trichocarpa
Potri.005G226100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 23642283-23652282 Populus trichocarpa
Potri.005G226100 10.0kb downstream 10.0kb downstream 18311 true Chr05: 23623972-23642282 Populus trichocarpa
Potri.005G226100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 23623972-23633971 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041028 5273 Angiosperm View MSA
122458506 5262 Malpighiales View MSA
124253073 5268 Malvidae View MSA
124066748 5270 Rosid View MSA
123737285 5271 Pentapetalae View MSA
122787550 5272 Eudicot View MSA
121344151 5274 Embryophyte View MSA
123379986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain