Gene : Potri.005G195400 P. trichocarpa v3.1
Defline:  (1 of 1) KOG4442 - Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis Genomic Order:  2038
Name:  ? Potri.005G195400 Secondary Identifier:  ? PAC:37264838
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G195400 0.5kb upstream 0.5kb upstream 7472 true Chr05: 21218048-21225519 Populus trichocarpa
Potri.005G195400 0.5kb upstream 0.5kb upstream 500 false Chr05: 21218048-21218547 Populus trichocarpa
Potri.005G195400 0.5kb downstream 0.5kb downstream 7472 true Chr05: 21218548-21226019 Populus trichocarpa
Potri.005G195400 0.5kb downstream 0.5kb downstream 500 false Chr05: 21225520-21226019 Populus trichocarpa
Potri.005G195400 1.0kb upstream 1.0kb upstream 7972 true Chr05: 21217548-21225519 Populus trichocarpa
Potri.005G195400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21217548-21218547 Populus trichocarpa
Potri.005G195400 1.0kb downstream 1.0kb downstream 7972 true Chr05: 21218548-21226519 Populus trichocarpa
Potri.005G195400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21225520-21226519 Populus trichocarpa
Potri.005G195400 2.0kb upstream 2.0kb upstream 8972 true Chr05: 21216548-21225519 Populus trichocarpa
Potri.005G195400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21216548-21218547 Populus trichocarpa
Potri.005G195400 2.0kb downstream 2.0kb downstream 8972 true Chr05: 21218548-21227519 Populus trichocarpa
Potri.005G195400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21225520-21227519 Populus trichocarpa
Potri.005G195400 5.0kb upstream 5.0kb upstream 11972 true Chr05: 21213548-21225519 Populus trichocarpa
Potri.005G195400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21213548-21218547 Populus trichocarpa
Potri.005G195400 5.0kb downstream 5.0kb downstream 11972 true Chr05: 21218548-21230519 Populus trichocarpa
Potri.005G195400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21225520-21230519 Populus trichocarpa
Potri.005G195400 10.0kb upstream 10.0kb upstream 16972 true Chr05: 21208548-21225519 Populus trichocarpa
Potri.005G195400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21208548-21218547 Populus trichocarpa
Potri.005G195400 10.0kb downstream 10.0kb downstream 16972 true Chr05: 21218548-21235519 Populus trichocarpa
Potri.005G195400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21225520-21235519 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458647 5262 Malpighiales View MSA
124242259 5268 Malvidae View MSA
124065473 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain