Gene : Potri.005G200700 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR11709:SF94 - LACCASE-15 Genomic Order:  2093
Name:  ? Potri.005G200700 Secondary Identifier:  ? PAC:37265859
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G200700 0.5kb upstream 0.5kb upstream 3087 true Chr05: 21626843-21629929 Populus trichocarpa
Potri.005G200700 0.5kb upstream 0.5kb upstream 500 false Chr05: 21629430-21629929 Populus trichocarpa
Potri.005G200700 0.5kb downstream 0.5kb downstream 3087 true Chr05: 21626343-21629429 Populus trichocarpa
Potri.005G200700 0.5kb downstream 0.5kb downstream 500 false Chr05: 21626343-21626842 Populus trichocarpa
Potri.005G200700 1.0kb upstream 1.0kb upstream 3587 true Chr05: 21626843-21630429 Populus trichocarpa
Potri.005G200700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21629430-21630429 Populus trichocarpa
Potri.005G200700 1.0kb downstream 1.0kb downstream 3587 true Chr05: 21625843-21629429 Populus trichocarpa
Potri.005G200700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21625843-21626842 Populus trichocarpa
Potri.005G200700 2.0kb upstream 2.0kb upstream 4587 true Chr05: 21626843-21631429 Populus trichocarpa
Potri.005G200700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21629430-21631429 Populus trichocarpa
Potri.005G200700 2.0kb downstream 2.0kb downstream 4587 true Chr05: 21624843-21629429 Populus trichocarpa
Potri.005G200700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21624843-21626842 Populus trichocarpa
Potri.005G200700 5.0kb upstream 5.0kb upstream 7587 true Chr05: 21626843-21634429 Populus trichocarpa
Potri.005G200700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21629430-21634429 Populus trichocarpa
Potri.005G200700 5.0kb downstream 5.0kb downstream 7587 true Chr05: 21621843-21629429 Populus trichocarpa
Potri.005G200700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21621843-21626842 Populus trichocarpa
Potri.005G200700 10.0kb upstream 10.0kb upstream 12587 true Chr05: 21626843-21639429 Populus trichocarpa
Potri.005G200700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21629430-21639429 Populus trichocarpa
Potri.005G200700 10.0kb downstream 10.0kb downstream 12587 true Chr05: 21616843-21629429 Populus trichocarpa
Potri.005G200700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21616843-21626842 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122411497 5262 Malpighiales View MSA
124253162 5268 Malvidae View MSA
124074925 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain