Gene : Potri.005G200600 P. trichocarpa v3.1
Defline:  (1 of 5) PTHR11709:SF88 - LACCASE-14 Genomic Order:  2092
Name:  ? Potri.005G200600 Secondary Identifier:  ? PAC:37262821
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G200600 0.5kb upstream 0.5kb upstream 4565 true Chr05: 21614646-21619210 Populus trichocarpa
Potri.005G200600 0.5kb upstream 0.5kb upstream 500 false Chr05: 21618711-21619210 Populus trichocarpa
Potri.005G200600 0.5kb downstream 0.5kb downstream 4565 true Chr05: 21614146-21618710 Populus trichocarpa
Potri.005G200600 0.5kb downstream 0.5kb downstream 500 false Chr05: 21614146-21614645 Populus trichocarpa
Potri.005G200600 1.0kb upstream 1.0kb upstream 5065 true Chr05: 21614646-21619710 Populus trichocarpa
Potri.005G200600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21618711-21619710 Populus trichocarpa
Potri.005G200600 1.0kb downstream 1.0kb downstream 5065 true Chr05: 21613646-21618710 Populus trichocarpa
Potri.005G200600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21613646-21614645 Populus trichocarpa
Potri.005G200600 2.0kb upstream 2.0kb upstream 6065 true Chr05: 21614646-21620710 Populus trichocarpa
Potri.005G200600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21618711-21620710 Populus trichocarpa
Potri.005G200600 2.0kb downstream 2.0kb downstream 6065 true Chr05: 21612646-21618710 Populus trichocarpa
Potri.005G200600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21612646-21614645 Populus trichocarpa
Potri.005G200600 5.0kb upstream 5.0kb upstream 9065 true Chr05: 21614646-21623710 Populus trichocarpa
Potri.005G200600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21618711-21623710 Populus trichocarpa
Potri.005G200600 5.0kb downstream 5.0kb downstream 9065 true Chr05: 21609646-21618710 Populus trichocarpa
Potri.005G200600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21609646-21614645 Populus trichocarpa
Potri.005G200600 10.0kb upstream 10.0kb upstream 14065 true Chr05: 21614646-21628710 Populus trichocarpa
Potri.005G200600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21618711-21628710 Populus trichocarpa
Potri.005G200600 10.0kb downstream 10.0kb downstream 14065 true Chr05: 21604646-21618710 Populus trichocarpa
Potri.005G200600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21604646-21614645 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122411497 5262 Malpighiales View MSA
124253162 5268 Malvidae View MSA
124074925 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain