Gene : Potri.005G199000 P. trichocarpa v3.1

Defline:  (1 of 2) K02221 - YggT family protein (yggT) Genomic Order:  2075
Name:  ? Potri.005G199000 Secondary Identifier:  ? PAC:37264249

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G199000 0.5kb upstream 0.5kb upstream 2557 true Chr05: 21477119-21479675 Populus trichocarpa
Potri.005G199000 0.5kb upstream 0.5kb upstream 500 false Chr05: 21479176-21479675 Populus trichocarpa
Potri.005G199000 0.5kb downstream 0.5kb downstream 2557 true Chr05: 21476619-21479175 Populus trichocarpa
Potri.005G199000 0.5kb downstream 0.5kb downstream 500 false Chr05: 21476619-21477118 Populus trichocarpa
Potri.005G199000 1.0kb upstream 1.0kb upstream 3057 true Chr05: 21477119-21480175 Populus trichocarpa
Potri.005G199000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21479176-21480175 Populus trichocarpa
Potri.005G199000 1.0kb downstream 1.0kb downstream 3057 true Chr05: 21476119-21479175 Populus trichocarpa
Potri.005G199000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21476119-21477118 Populus trichocarpa
Potri.005G199000 2.0kb upstream 2.0kb upstream 4057 true Chr05: 21477119-21481175 Populus trichocarpa
Potri.005G199000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21479176-21481175 Populus trichocarpa
Potri.005G199000 2.0kb downstream 2.0kb downstream 4057 true Chr05: 21475119-21479175 Populus trichocarpa
Potri.005G199000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21475119-21477118 Populus trichocarpa
Potri.005G199000 5.0kb upstream 5.0kb upstream 7057 true Chr05: 21477119-21484175 Populus trichocarpa
Potri.005G199000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21479176-21484175 Populus trichocarpa
Potri.005G199000 5.0kb downstream 5.0kb downstream 7057 true Chr05: 21472119-21479175 Populus trichocarpa
Potri.005G199000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21472119-21477118 Populus trichocarpa
Potri.005G199000 10.0kb upstream 10.0kb upstream 12057 true Chr05: 21477119-21489175 Populus trichocarpa
Potri.005G199000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21479176-21489175 Populus trichocarpa
Potri.005G199000 10.0kb downstream 10.0kb downstream 12057 true Chr05: 21467119-21479175 Populus trichocarpa
Potri.005G199000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21467119-21477118 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122384780 5262 Malpighiales View MSA
124248854 5268 Malvidae View MSA
124071156 5270 Rosid View MSA
123749054 5271 Pentapetalae View MSA
122791732 5272 Eudicot View MSA
122048332 5273 Angiosperm View MSA
121348595 5274 Embryophyte View MSA
123428591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain