Gene : Potri.005G179800 P. trichocarpa v3.1
Defline:  (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Genomic Order:  1877
Name:  ? Potri.005G179800 Secondary Identifier:  ? PAC:37263128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G179800 0.5kb upstream 0.5kb upstream 5500 true Chr05: 19592587-19598086 Populus trichocarpa
Potri.005G179800 0.5kb upstream 0.5kb upstream 500 false Chr05: 19592587-19593086 Populus trichocarpa
Potri.005G179800 0.5kb downstream 0.5kb downstream 5500 true Chr05: 19593087-19598586 Populus trichocarpa
Potri.005G179800 0.5kb downstream 0.5kb downstream 500 false Chr05: 19598087-19598586 Populus trichocarpa
Potri.005G179800 1.0kb upstream 1.0kb upstream 6000 true Chr05: 19592087-19598086 Populus trichocarpa
Potri.005G179800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19592087-19593086 Populus trichocarpa
Potri.005G179800 1.0kb downstream 1.0kb downstream 6000 true Chr05: 19593087-19599086 Populus trichocarpa
Potri.005G179800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19598087-19599086 Populus trichocarpa
Potri.005G179800 2.0kb upstream 2.0kb upstream 7000 true Chr05: 19591087-19598086 Populus trichocarpa
Potri.005G179800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19591087-19593086 Populus trichocarpa
Potri.005G179800 2.0kb downstream 2.0kb downstream 7000 true Chr05: 19593087-19600086 Populus trichocarpa
Potri.005G179800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19598087-19600086 Populus trichocarpa
Potri.005G179800 5.0kb upstream 5.0kb upstream 10000 true Chr05: 19588087-19598086 Populus trichocarpa
Potri.005G179800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19588087-19593086 Populus trichocarpa
Potri.005G179800 5.0kb downstream 5.0kb downstream 10000 true Chr05: 19593087-19603086 Populus trichocarpa
Potri.005G179800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19598087-19603086 Populus trichocarpa
Potri.005G179800 10.0kb upstream 10.0kb upstream 15000 true Chr05: 19583087-19598086 Populus trichocarpa
Potri.005G179800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19583087-19593086 Populus trichocarpa
Potri.005G179800 10.0kb downstream 10.0kb downstream 15000 true Chr05: 19593087-19608086 Populus trichocarpa
Potri.005G179800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19598087-19608086 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456938 5262 Malpighiales View MSA
124240379 5268 Malvidae View MSA
124068915 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain