Gene : Potri.005G175900 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31423//PTHR31423:SF3 - FAMILY NOT NAMED // PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  1836
Name:  ? Potri.005G175900 Secondary Identifier:  ? PAC:37262416
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G175900 0.5kb upstream 0.5kb upstream 6378 true Chr05: 19164654-19171031 Populus trichocarpa
Potri.005G175900 0.5kb upstream 0.5kb upstream 500 false Chr05: 19170532-19171031 Populus trichocarpa
Potri.005G175900 0.5kb downstream 0.5kb downstream 6378 true Chr05: 19164154-19170531 Populus trichocarpa
Potri.005G175900 0.5kb downstream 0.5kb downstream 500 false Chr05: 19164154-19164653 Populus trichocarpa
Potri.005G175900 1.0kb upstream 1.0kb upstream 6878 true Chr05: 19164654-19171531 Populus trichocarpa
Potri.005G175900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19170532-19171531 Populus trichocarpa
Potri.005G175900 1.0kb downstream 1.0kb downstream 6878 true Chr05: 19163654-19170531 Populus trichocarpa
Potri.005G175900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19163654-19164653 Populus trichocarpa
Potri.005G175900 2.0kb upstream 2.0kb upstream 7878 true Chr05: 19164654-19172531 Populus trichocarpa
Potri.005G175900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19170532-19172531 Populus trichocarpa
Potri.005G175900 2.0kb downstream 2.0kb downstream 7878 true Chr05: 19162654-19170531 Populus trichocarpa
Potri.005G175900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19162654-19164653 Populus trichocarpa
Potri.005G175900 5.0kb upstream 5.0kb upstream 10878 true Chr05: 19164654-19175531 Populus trichocarpa
Potri.005G175900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19170532-19175531 Populus trichocarpa
Potri.005G175900 5.0kb downstream 5.0kb downstream 10878 true Chr05: 19159654-19170531 Populus trichocarpa
Potri.005G175900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19159654-19164653 Populus trichocarpa
Potri.005G175900 10.0kb upstream 10.0kb upstream 15878 true Chr05: 19164654-19180531 Populus trichocarpa
Potri.005G175900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19170532-19180531 Populus trichocarpa
Potri.005G175900 10.0kb downstream 10.0kb downstream 15878 true Chr05: 19154654-19170531 Populus trichocarpa
Potri.005G175900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19154654-19164653 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453510 5262 Malpighiales View MSA
124237844 5268 Malvidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain