Gene : Potri.005G178100 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31580:SF2 - FILAMENT-LIKE PLANT PROTEIN 1-RELATED Genomic Order:  1860
Name:  ? Potri.005G178100 Secondary Identifier:  ? PAC:37265840
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G178100 0.5kb upstream 0.5kb upstream 4885 true Chr05: 19416719-19421603 Populus trichocarpa
Potri.005G178100 0.5kb upstream 0.5kb upstream 500 false Chr05: 19416719-19417218 Populus trichocarpa
Potri.005G178100 0.5kb downstream 0.5kb downstream 4885 true Chr05: 19417219-19422103 Populus trichocarpa
Potri.005G178100 0.5kb downstream 0.5kb downstream 500 false Chr05: 19421604-19422103 Populus trichocarpa
Potri.005G178100 1.0kb upstream 1.0kb upstream 5385 true Chr05: 19416219-19421603 Populus trichocarpa
Potri.005G178100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19416219-19417218 Populus trichocarpa
Potri.005G178100 1.0kb downstream 1.0kb downstream 5385 true Chr05: 19417219-19422603 Populus trichocarpa
Potri.005G178100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19421604-19422603 Populus trichocarpa
Potri.005G178100 2.0kb upstream 2.0kb upstream 6385 true Chr05: 19415219-19421603 Populus trichocarpa
Potri.005G178100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19415219-19417218 Populus trichocarpa
Potri.005G178100 2.0kb downstream 2.0kb downstream 6385 true Chr05: 19417219-19423603 Populus trichocarpa
Potri.005G178100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19421604-19423603 Populus trichocarpa
Potri.005G178100 5.0kb upstream 5.0kb upstream 9385 true Chr05: 19412219-19421603 Populus trichocarpa
Potri.005G178100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19412219-19417218 Populus trichocarpa
Potri.005G178100 5.0kb downstream 5.0kb downstream 9385 true Chr05: 19417219-19426603 Populus trichocarpa
Potri.005G178100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19421604-19426603 Populus trichocarpa
Potri.005G178100 10.0kb upstream 10.0kb upstream 14385 true Chr05: 19407219-19421603 Populus trichocarpa
Potri.005G178100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19407219-19417218 Populus trichocarpa
Potri.005G178100 10.0kb downstream 10.0kb downstream 14385 true Chr05: 19417219-19431603 Populus trichocarpa
Potri.005G178100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19421604-19431603 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122411149 5262 Malpighiales View MSA
124205946 5268 Malvidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain