Gene : Potri.006G027300 P. trichocarpa v3.1
Defline:  (1 of 2) 1.14.13.81 - Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase / Mg-protoporphyrin IX monomethyl ester oxidative cyclase Genomic Order:  279
Name:  ? Potri.006G027300 Secondary Identifier:  ? PAC:37246096
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CHLOROPHYLL-SYN Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G027300 0.5kb upstream 0.5kb upstream 3098 true Chr06: 1834911-1838008 Populus trichocarpa
Potri.006G027300 0.5kb upstream 0.5kb upstream 500 false Chr06: 1837509-1838008 Populus trichocarpa
Potri.006G027300 0.5kb downstream 0.5kb downstream 3098 true Chr06: 1834411-1837508 Populus trichocarpa
Potri.006G027300 0.5kb downstream 0.5kb downstream 500 false Chr06: 1834411-1834910 Populus trichocarpa
Potri.006G027300 1.0kb upstream 1.0kb upstream 3598 true Chr06: 1834911-1838508 Populus trichocarpa
Potri.006G027300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1837509-1838508 Populus trichocarpa
Potri.006G027300 1.0kb downstream 1.0kb downstream 3598 true Chr06: 1833911-1837508 Populus trichocarpa
Potri.006G027300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1833911-1834910 Populus trichocarpa
Potri.006G027300 2.0kb upstream 2.0kb upstream 4598 true Chr06: 1834911-1839508 Populus trichocarpa
Potri.006G027300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1837509-1839508 Populus trichocarpa
Potri.006G027300 2.0kb downstream 2.0kb downstream 4598 true Chr06: 1832911-1837508 Populus trichocarpa
Potri.006G027300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1832911-1834910 Populus trichocarpa
Potri.006G027300 5.0kb upstream 5.0kb upstream 7598 true Chr06: 1834911-1842508 Populus trichocarpa
Potri.006G027300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1837509-1842508 Populus trichocarpa
Potri.006G027300 5.0kb downstream 5.0kb downstream 7598 true Chr06: 1829911-1837508 Populus trichocarpa
Potri.006G027300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1829911-1834910 Populus trichocarpa
Potri.006G027300 10.0kb upstream 10.0kb upstream 12598 true Chr06: 1834911-1847508 Populus trichocarpa
Potri.006G027300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1837509-1847508 Populus trichocarpa
Potri.006G027300 10.0kb downstream 10.0kb downstream 12598 true Chr06: 1824911-1837508 Populus trichocarpa
Potri.006G027300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1824911-1834910 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454109 5262 Malpighiales View MSA
124242983 5268 Malvidae View MSA
124064465 5270 Rosid View MSA
123737213 5271 Pentapetalae View MSA
122789972 5272 Eudicot View MSA
122044823 5273 Angiosperm View MSA
121345959 5274 Embryophyte View MSA
123424479 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain