Gene : Potri.006G027100 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR14190:SF7 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 52 HOMOLOG Genomic Order:  277
Name:  ? Potri.006G027100 Secondary Identifier:  ? PAC:37245839
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G027100 0.5kb upstream 0.5kb upstream 7411 true Chr06: 1823854-1831264 Populus trichocarpa
Potri.006G027100 0.5kb upstream 0.5kb upstream 500 false Chr06: 1823854-1824353 Populus trichocarpa
Potri.006G027100 0.5kb downstream 0.5kb downstream 7411 true Chr06: 1824354-1831764 Populus trichocarpa
Potri.006G027100 0.5kb downstream 0.5kb downstream 500 false Chr06: 1831265-1831764 Populus trichocarpa
Potri.006G027100 1.0kb upstream 1.0kb upstream 7911 true Chr06: 1823354-1831264 Populus trichocarpa
Potri.006G027100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1823354-1824353 Populus trichocarpa
Potri.006G027100 1.0kb downstream 1.0kb downstream 7911 true Chr06: 1824354-1832264 Populus trichocarpa
Potri.006G027100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1831265-1832264 Populus trichocarpa
Potri.006G027100 2.0kb upstream 2.0kb upstream 8911 true Chr06: 1822354-1831264 Populus trichocarpa
Potri.006G027100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1822354-1824353 Populus trichocarpa
Potri.006G027100 2.0kb downstream 2.0kb downstream 8911 true Chr06: 1824354-1833264 Populus trichocarpa
Potri.006G027100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1831265-1833264 Populus trichocarpa
Potri.006G027100 5.0kb upstream 5.0kb upstream 11911 true Chr06: 1819354-1831264 Populus trichocarpa
Potri.006G027100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1819354-1824353 Populus trichocarpa
Potri.006G027100 5.0kb downstream 5.0kb downstream 11911 true Chr06: 1824354-1836264 Populus trichocarpa
Potri.006G027100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1831265-1836264 Populus trichocarpa
Potri.006G027100 10.0kb upstream 10.0kb upstream 16911 true Chr06: 1814354-1831264 Populus trichocarpa
Potri.006G027100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1814354-1824353 Populus trichocarpa
Potri.006G027100 10.0kb downstream 10.0kb downstream 16911 true Chr06: 1824354-1841264 Populus trichocarpa
Potri.006G027100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1831265-1841264 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450226 5262 Malpighiales View MSA
124239789 5268 Malvidae View MSA
124065275 5270 Rosid View MSA
123738224 5271 Pentapetalae View MSA
122792330 5272 Eudicot View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain