Gene : Potri.006G027000 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR22778//PTHR22778:SF22 - OVARIAN CANCER GENE-2 PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  276
Name:  ? Potri.006G027000 Secondary Identifier:  ? PAC:37246107
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-3841 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6612 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6614 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G027000 0.5kb upstream 0.5kb upstream 2975 true Chr06: 1820399-1823373 Populus trichocarpa
Potri.006G027000 0.5kb upstream 0.5kb upstream 500 false Chr06: 1820399-1820898 Populus trichocarpa
Potri.006G027000 0.5kb downstream 0.5kb downstream 2975 true Chr06: 1820899-1823873 Populus trichocarpa
Potri.006G027000 0.5kb downstream 0.5kb downstream 500 false Chr06: 1823374-1823873 Populus trichocarpa
Potri.006G027000 1.0kb upstream 1.0kb upstream 3475 true Chr06: 1819899-1823373 Populus trichocarpa
Potri.006G027000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1819899-1820898 Populus trichocarpa
Potri.006G027000 1.0kb downstream 1.0kb downstream 3475 true Chr06: 1820899-1824373 Populus trichocarpa
Potri.006G027000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1823374-1824373 Populus trichocarpa
Potri.006G027000 2.0kb upstream 2.0kb upstream 4475 true Chr06: 1818899-1823373 Populus trichocarpa
Potri.006G027000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1818899-1820898 Populus trichocarpa
Potri.006G027000 2.0kb downstream 2.0kb downstream 4475 true Chr06: 1820899-1825373 Populus trichocarpa
Potri.006G027000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1823374-1825373 Populus trichocarpa
Potri.006G027000 5.0kb upstream 5.0kb upstream 7475 true Chr06: 1815899-1823373 Populus trichocarpa
Potri.006G027000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1815899-1820898 Populus trichocarpa
Potri.006G027000 5.0kb downstream 5.0kb downstream 7475 true Chr06: 1820899-1828373 Populus trichocarpa
Potri.006G027000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1823374-1828373 Populus trichocarpa
Potri.006G027000 10.0kb upstream 10.0kb upstream 12475 true Chr06: 1810899-1823373 Populus trichocarpa
Potri.006G027000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1810899-1820898 Populus trichocarpa
Potri.006G027000 10.0kb downstream 10.0kb downstream 12475 true Chr06: 1820899-1833373 Populus trichocarpa
Potri.006G027000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1823374-1833373 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460896 5262 Malpighiales View MSA
124246208 5268 Malvidae View MSA
124070831 5270 Rosid View MSA
123747932 5271 Pentapetalae View MSA
122794678 5272 Eudicot View MSA
122048467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348869 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain