Gene : Potri.006G004500 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR31573:SF1 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 Genomic Order:  48
Name:  ? Potri.006G004500 Secondary Identifier:  ? PAC:37245612
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G004500 0.5kb upstream 0.5kb upstream 3193 true Chr06: 323676-326868 Populus trichocarpa
Potri.006G004500 0.5kb upstream 0.5kb upstream 500 false Chr06: 326369-326868 Populus trichocarpa
Potri.006G004500 0.5kb downstream 0.5kb downstream 3193 true Chr06: 323176-326368 Populus trichocarpa
Potri.006G004500 0.5kb downstream 0.5kb downstream 500 false Chr06: 323176-323675 Populus trichocarpa
Potri.006G004500 1.0kb upstream 1.0kb upstream 3693 true Chr06: 323676-327368 Populus trichocarpa
Potri.006G004500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 326369-327368 Populus trichocarpa
Potri.006G004500 1.0kb downstream 1.0kb downstream 3693 true Chr06: 322676-326368 Populus trichocarpa
Potri.006G004500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 322676-323675 Populus trichocarpa
Potri.006G004500 2.0kb upstream 2.0kb upstream 4693 true Chr06: 323676-328368 Populus trichocarpa
Potri.006G004500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 326369-328368 Populus trichocarpa
Potri.006G004500 2.0kb downstream 2.0kb downstream 4693 true Chr06: 321676-326368 Populus trichocarpa
Potri.006G004500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 321676-323675 Populus trichocarpa
Potri.006G004500 5.0kb upstream 5.0kb upstream 7693 true Chr06: 323676-331368 Populus trichocarpa
Potri.006G004500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 326369-331368 Populus trichocarpa
Potri.006G004500 5.0kb downstream 5.0kb downstream 7693 true Chr06: 318676-326368 Populus trichocarpa
Potri.006G004500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 318676-323675 Populus trichocarpa
Potri.006G004500 10.0kb upstream 10.0kb upstream 12693 true Chr06: 323676-336368 Populus trichocarpa
Potri.006G004500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 326369-336368 Populus trichocarpa
Potri.006G004500 10.0kb downstream 10.0kb downstream 12693 true Chr06: 313676-326368 Populus trichocarpa
Potri.006G004500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 313676-323675 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451670 5262 Malpighiales View MSA
124237545 5268 Malvidae View MSA
124050829 5270 Rosid View MSA
123749996 5271 Pentapetalae View MSA
122791674 5272 Eudicot View MSA
122048951 5273 Angiosperm View MSA
121351428 5274 Embryophyte View MSA
123423770 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain