Gene : Potri.005G248500 P. trichocarpa v3.1
Defline:  (1 of 2) K10526 - OPC-8:0 CoA ligase 1 (OPCL1) Genomic Order:  2589
Name:  ? Potri.005G248500 Secondary Identifier:  ? PAC:37262670
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G248500 0.5kb upstream 0.5kb upstream 5251 true Chr05: 25179265-25184515 Populus trichocarpa
Potri.005G248500 0.5kb upstream 0.5kb upstream 500 false Chr05: 25184016-25184515 Populus trichocarpa
Potri.005G248500 0.5kb downstream 0.5kb downstream 5251 true Chr05: 25178765-25184015 Populus trichocarpa
Potri.005G248500 0.5kb downstream 0.5kb downstream 500 false Chr05: 25178765-25179264 Populus trichocarpa
Potri.005G248500 1.0kb upstream 1.0kb upstream 5751 true Chr05: 25179265-25185015 Populus trichocarpa
Potri.005G248500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 25184016-25185015 Populus trichocarpa
Potri.005G248500 1.0kb downstream 1.0kb downstream 5751 true Chr05: 25178265-25184015 Populus trichocarpa
Potri.005G248500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 25178265-25179264 Populus trichocarpa
Potri.005G248500 2.0kb upstream 2.0kb upstream 6751 true Chr05: 25179265-25186015 Populus trichocarpa
Potri.005G248500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 25184016-25186015 Populus trichocarpa
Potri.005G248500 2.0kb downstream 2.0kb downstream 6751 true Chr05: 25177265-25184015 Populus trichocarpa
Potri.005G248500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 25177265-25179264 Populus trichocarpa
Potri.005G248500 5.0kb upstream 5.0kb upstream 9751 true Chr05: 25179265-25189015 Populus trichocarpa
Potri.005G248500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 25184016-25189015 Populus trichocarpa
Potri.005G248500 5.0kb downstream 5.0kb downstream 9751 true Chr05: 25174265-25184015 Populus trichocarpa
Potri.005G248500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 25174265-25179264 Populus trichocarpa
Potri.005G248500 10.0kb upstream 10.0kb upstream 14751 true Chr05: 25179265-25194015 Populus trichocarpa
Potri.005G248500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 25184016-25194015 Populus trichocarpa
Potri.005G248500 10.0kb downstream 10.0kb downstream 14751 true Chr05: 25169265-25184015 Populus trichocarpa
Potri.005G248500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 25169265-25179264 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451364 5262 Malpighiales View MSA
124237621 5268 Malvidae View MSA
124062315 5270 Rosid View MSA
123736531 5271 Pentapetalae View MSA
122785928 5272 Eudicot View MSA
122043430 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain