Gene : Potri.005G240100 P. trichocarpa v3.1
Defline:  (1 of 1) KOG0279//KOG0645//KOG1036 - G protein beta subunit-like protein // WD40 repeat protein // Mitotic spindle checkpoint protein BUB3, WD repeat superfamily Genomic Order:  2502
Name:  ? Potri.005G240100 Secondary Identifier:  ? PAC:37264477
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G240100 0.5kb upstream 0.5kb upstream 7684 true Chr05: 24622557-24630240 Populus trichocarpa
Potri.005G240100 0.5kb upstream 0.5kb upstream 500 false Chr05: 24629741-24630240 Populus trichocarpa
Potri.005G240100 0.5kb downstream 0.5kb downstream 7684 true Chr05: 24622057-24629740 Populus trichocarpa
Potri.005G240100 0.5kb downstream 0.5kb downstream 500 false Chr05: 24622057-24622556 Populus trichocarpa
Potri.005G240100 1.0kb upstream 1.0kb upstream 8184 true Chr05: 24622557-24630740 Populus trichocarpa
Potri.005G240100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 24629741-24630740 Populus trichocarpa
Potri.005G240100 1.0kb downstream 1.0kb downstream 8184 true Chr05: 24621557-24629740 Populus trichocarpa
Potri.005G240100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 24621557-24622556 Populus trichocarpa
Potri.005G240100 2.0kb upstream 2.0kb upstream 9184 true Chr05: 24622557-24631740 Populus trichocarpa
Potri.005G240100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 24629741-24631740 Populus trichocarpa
Potri.005G240100 2.0kb downstream 2.0kb downstream 9184 true Chr05: 24620557-24629740 Populus trichocarpa
Potri.005G240100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 24620557-24622556 Populus trichocarpa
Potri.005G240100 5.0kb upstream 5.0kb upstream 12184 true Chr05: 24622557-24634740 Populus trichocarpa
Potri.005G240100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 24629741-24634740 Populus trichocarpa
Potri.005G240100 5.0kb downstream 5.0kb downstream 12184 true Chr05: 24617557-24629740 Populus trichocarpa
Potri.005G240100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 24617557-24622556 Populus trichocarpa
Potri.005G240100 10.0kb upstream 10.0kb upstream 17184 true Chr05: 24622557-24639740 Populus trichocarpa
Potri.005G240100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 24629741-24639740 Populus trichocarpa
Potri.005G240100 10.0kb downstream 10.0kb downstream 17184 true Chr05: 24612557-24629740 Populus trichocarpa
Potri.005G240100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 24612557-24622556 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448865 5262 Malpighiales View MSA
124245305 5268 Malvidae View MSA
124069728 5270 Rosid View MSA
123741699 5271 Pentapetalae View MSA
122795332 5272 Eudicot View MSA
122049229 5273 Angiosperm View MSA
121348338 5274 Embryophyte View MSA
123380824 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain