Gene : Potri.006G087100 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR11709:SF66 - LACCASE-17 Genomic Order:  891
Name:  ? Potri.006G087100 Secondary Identifier:  ? PAC:37245459
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G087100 0.5kb upstream 0.5kb upstream 3586 true Chr06: 6658778-6662363 Populus trichocarpa
Potri.006G087100 0.5kb upstream 0.5kb upstream 500 false Chr06: 6658778-6659277 Populus trichocarpa
Potri.006G087100 0.5kb downstream 0.5kb downstream 3586 true Chr06: 6659278-6662863 Populus trichocarpa
Potri.006G087100 0.5kb downstream 0.5kb downstream 500 false Chr06: 6662364-6662863 Populus trichocarpa
Potri.006G087100 1.0kb upstream 1.0kb upstream 4086 true Chr06: 6658278-6662363 Populus trichocarpa
Potri.006G087100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6658278-6659277 Populus trichocarpa
Potri.006G087100 1.0kb downstream 1.0kb downstream 4086 true Chr06: 6659278-6663363 Populus trichocarpa
Potri.006G087100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6662364-6663363 Populus trichocarpa
Potri.006G087100 2.0kb upstream 2.0kb upstream 5086 true Chr06: 6657278-6662363 Populus trichocarpa
Potri.006G087100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6657278-6659277 Populus trichocarpa
Potri.006G087100 2.0kb downstream 2.0kb downstream 5086 true Chr06: 6659278-6664363 Populus trichocarpa
Potri.006G087100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6662364-6664363 Populus trichocarpa
Potri.006G087100 5.0kb upstream 5.0kb upstream 8086 true Chr06: 6654278-6662363 Populus trichocarpa
Potri.006G087100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6654278-6659277 Populus trichocarpa
Potri.006G087100 5.0kb downstream 5.0kb downstream 8086 true Chr06: 6659278-6667363 Populus trichocarpa
Potri.006G087100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6662364-6667363 Populus trichocarpa
Potri.006G087100 10.0kb upstream 10.0kb upstream 13086 true Chr06: 6649278-6662363 Populus trichocarpa
Potri.006G087100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6649278-6659277 Populus trichocarpa
Potri.006G087100 10.0kb downstream 10.0kb downstream 13086 true Chr06: 6659278-6672363 Populus trichocarpa
Potri.006G087100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6662364-6672363 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458374 5262 Malpighiales View MSA
124253121 5268 Malvidae View MSA
124069683 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain