Gene : Potri.006G087500 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR11709:SF62 - LACCASE-2 Genomic Order:  895
Name:  ? Potri.006G087500 Secondary Identifier:  ? PAC:37244001
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G087500 0.5kb upstream 0.5kb upstream 3477 true Chr06: 6681746-6685222 Populus trichocarpa
Potri.006G087500 0.5kb upstream 0.5kb upstream 500 false Chr06: 6684723-6685222 Populus trichocarpa
Potri.006G087500 0.5kb downstream 0.5kb downstream 3477 true Chr06: 6681246-6684722 Populus trichocarpa
Potri.006G087500 0.5kb downstream 0.5kb downstream 500 false Chr06: 6681246-6681745 Populus trichocarpa
Potri.006G087500 1.0kb upstream 1.0kb upstream 3977 true Chr06: 6681746-6685722 Populus trichocarpa
Potri.006G087500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6684723-6685722 Populus trichocarpa
Potri.006G087500 1.0kb downstream 1.0kb downstream 3977 true Chr06: 6680746-6684722 Populus trichocarpa
Potri.006G087500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6680746-6681745 Populus trichocarpa
Potri.006G087500 2.0kb upstream 2.0kb upstream 4977 true Chr06: 6681746-6686722 Populus trichocarpa
Potri.006G087500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6684723-6686722 Populus trichocarpa
Potri.006G087500 2.0kb downstream 2.0kb downstream 4977 true Chr06: 6679746-6684722 Populus trichocarpa
Potri.006G087500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6679746-6681745 Populus trichocarpa
Potri.006G087500 5.0kb upstream 5.0kb upstream 7977 true Chr06: 6681746-6689722 Populus trichocarpa
Potri.006G087500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6684723-6689722 Populus trichocarpa
Potri.006G087500 5.0kb downstream 5.0kb downstream 7977 true Chr06: 6676746-6684722 Populus trichocarpa
Potri.006G087500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6676746-6681745 Populus trichocarpa
Potri.006G087500 10.0kb upstream 10.0kb upstream 12977 true Chr06: 6681746-6694722 Populus trichocarpa
Potri.006G087500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6684723-6694722 Populus trichocarpa
Potri.006G087500 10.0kb downstream 10.0kb downstream 12977 true Chr06: 6671746-6684722 Populus trichocarpa
Potri.006G087500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6671746-6681745 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461746 5262 Malpighiales View MSA
124245612 5268 Malvidae View MSA
124070693 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain