Gene : Potri.006G077800 P. trichocarpa v3.1
Defline:  (1 of 25) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  798
Name:  ? Potri.006G077800 Secondary Identifier:  ? PAC:37243102
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G077800 0.5kb upstream 0.5kb upstream 8551 true Chr06: 5882610-5891160 Populus trichocarpa
Potri.006G077800 0.5kb upstream 0.5kb upstream 500 false Chr06: 5882610-5883109 Populus trichocarpa
Potri.006G077800 0.5kb downstream 0.5kb downstream 8551 true Chr06: 5883110-5891660 Populus trichocarpa
Potri.006G077800 0.5kb downstream 0.5kb downstream 500 false Chr06: 5891161-5891660 Populus trichocarpa
Potri.006G077800 1.0kb upstream 1.0kb upstream 9051 true Chr06: 5882110-5891160 Populus trichocarpa
Potri.006G077800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5882110-5883109 Populus trichocarpa
Potri.006G077800 1.0kb downstream 1.0kb downstream 9051 true Chr06: 5883110-5892160 Populus trichocarpa
Potri.006G077800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5891161-5892160 Populus trichocarpa
Potri.006G077800 2.0kb upstream 2.0kb upstream 10051 true Chr06: 5881110-5891160 Populus trichocarpa
Potri.006G077800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5881110-5883109 Populus trichocarpa
Potri.006G077800 2.0kb downstream 2.0kb downstream 10051 true Chr06: 5883110-5893160 Populus trichocarpa
Potri.006G077800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5891161-5893160 Populus trichocarpa
Potri.006G077800 5.0kb upstream 5.0kb upstream 13051 true Chr06: 5878110-5891160 Populus trichocarpa
Potri.006G077800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5878110-5883109 Populus trichocarpa
Potri.006G077800 5.0kb downstream 5.0kb downstream 13051 true Chr06: 5883110-5896160 Populus trichocarpa
Potri.006G077800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5891161-5896160 Populus trichocarpa
Potri.006G077800 10.0kb upstream 10.0kb upstream 18051 true Chr06: 5873110-5891160 Populus trichocarpa
Potri.006G077800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5873110-5883109 Populus trichocarpa
Potri.006G077800 10.0kb downstream 10.0kb downstream 18051 true Chr06: 5883110-5901160 Populus trichocarpa
Potri.006G077800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5891161-5901160 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457987 5262 Malpighiales View MSA
124251074 5268 Malvidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain