Gene : Potri.006G057300 P. trichocarpa v3.1
Defline:  (1 of 4) KOG2729 - ER vesicle integral membrane protein involved in establishing cell polarity, signaling and protein degradation Genomic Order:  585
Name:  ? Potri.006G057300 Secondary Identifier:  ? PAC:37243298
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G057300 0.5kb upstream 0.5kb upstream 7079 true Chr06: 4176548-4183626 Populus trichocarpa
Potri.006G057300 0.5kb upstream 0.5kb upstream 500 false Chr06: 4183127-4183626 Populus trichocarpa
Potri.006G057300 0.5kb downstream 0.5kb downstream 7079 true Chr06: 4176048-4183126 Populus trichocarpa
Potri.006G057300 0.5kb downstream 0.5kb downstream 500 false Chr06: 4176048-4176547 Populus trichocarpa
Potri.006G057300 1.0kb upstream 1.0kb upstream 7579 true Chr06: 4176548-4184126 Populus trichocarpa
Potri.006G057300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4183127-4184126 Populus trichocarpa
Potri.006G057300 1.0kb downstream 1.0kb downstream 7579 true Chr06: 4175548-4183126 Populus trichocarpa
Potri.006G057300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4175548-4176547 Populus trichocarpa
Potri.006G057300 2.0kb upstream 2.0kb upstream 8579 true Chr06: 4176548-4185126 Populus trichocarpa
Potri.006G057300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4183127-4185126 Populus trichocarpa
Potri.006G057300 2.0kb downstream 2.0kb downstream 8579 true Chr06: 4174548-4183126 Populus trichocarpa
Potri.006G057300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4174548-4176547 Populus trichocarpa
Potri.006G057300 5.0kb upstream 5.0kb upstream 11579 true Chr06: 4176548-4188126 Populus trichocarpa
Potri.006G057300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4183127-4188126 Populus trichocarpa
Potri.006G057300 5.0kb downstream 5.0kb downstream 11579 true Chr06: 4171548-4183126 Populus trichocarpa
Potri.006G057300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4171548-4176547 Populus trichocarpa
Potri.006G057300 10.0kb upstream 10.0kb upstream 16579 true Chr06: 4176548-4193126 Populus trichocarpa
Potri.006G057300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4183127-4193126 Populus trichocarpa
Potri.006G057300 10.0kb downstream 10.0kb downstream 16579 true Chr06: 4166548-4183126 Populus trichocarpa
Potri.006G057300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4166548-4176547 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426420 5262 Malpighiales View MSA
124242420 5268 Malvidae View MSA
124067439 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain