Gene : Potri.006G048000 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR22942:SF41 - DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL Genomic Order:  489
Name:  ? Potri.006G048000 Secondary Identifier:  ? PAC:37246070
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G048000 0.5kb upstream 0.5kb upstream 5277 true Chr06: 3427814-3433090 Populus trichocarpa
Potri.006G048000 0.5kb upstream 0.5kb upstream 500 false Chr06: 3427814-3428313 Populus trichocarpa
Potri.006G048000 0.5kb downstream 0.5kb downstream 5277 true Chr06: 3428314-3433590 Populus trichocarpa
Potri.006G048000 0.5kb downstream 0.5kb downstream 500 false Chr06: 3433091-3433590 Populus trichocarpa
Potri.006G048000 1.0kb upstream 1.0kb upstream 5777 true Chr06: 3427314-3433090 Populus trichocarpa
Potri.006G048000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3427314-3428313 Populus trichocarpa
Potri.006G048000 1.0kb downstream 1.0kb downstream 5777 true Chr06: 3428314-3434090 Populus trichocarpa
Potri.006G048000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3433091-3434090 Populus trichocarpa
Potri.006G048000 2.0kb upstream 2.0kb upstream 6777 true Chr06: 3426314-3433090 Populus trichocarpa
Potri.006G048000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3426314-3428313 Populus trichocarpa
Potri.006G048000 2.0kb downstream 2.0kb downstream 6777 true Chr06: 3428314-3435090 Populus trichocarpa
Potri.006G048000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3433091-3435090 Populus trichocarpa
Potri.006G048000 5.0kb upstream 5.0kb upstream 9777 true Chr06: 3423314-3433090 Populus trichocarpa
Potri.006G048000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3423314-3428313 Populus trichocarpa
Potri.006G048000 5.0kb downstream 5.0kb downstream 9777 true Chr06: 3428314-3438090 Populus trichocarpa
Potri.006G048000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3433091-3438090 Populus trichocarpa
Potri.006G048000 10.0kb upstream 10.0kb upstream 14777 true Chr06: 3418314-3433090 Populus trichocarpa
Potri.006G048000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3418314-3428313 Populus trichocarpa
Potri.006G048000 10.0kb downstream 10.0kb downstream 14777 true Chr06: 3428314-3443090 Populus trichocarpa
Potri.006G048000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3433091-3443090 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026428 5273 Angiosperm View MSA
122461455 5262 Malpighiales View MSA
124238596 5268 Malvidae View MSA
124066586 5270 Rosid View MSA
123739358 5271 Pentapetalae View MSA
122787023 5272 Eudicot View MSA
121296323 5274 Embryophyte View MSA
123334505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain