Gene : Potri.006G048700 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Genomic Order:  496
Name:  ? Potri.006G048700 Secondary Identifier:  ? PAC:37241883
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G048700 0.5kb upstream 0.5kb upstream 3439 true Chr06: 3493767-3497205 Populus trichocarpa
Potri.006G048700 0.5kb upstream 0.5kb upstream 500 false Chr06: 3493767-3494266 Populus trichocarpa
Potri.006G048700 0.5kb downstream 0.5kb downstream 3439 true Chr06: 3494267-3497705 Populus trichocarpa
Potri.006G048700 0.5kb downstream 0.5kb downstream 500 false Chr06: 3497206-3497705 Populus trichocarpa
Potri.006G048700 1.0kb upstream 1.0kb upstream 3939 true Chr06: 3493267-3497205 Populus trichocarpa
Potri.006G048700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3493267-3494266 Populus trichocarpa
Potri.006G048700 1.0kb downstream 1.0kb downstream 3939 true Chr06: 3494267-3498205 Populus trichocarpa
Potri.006G048700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3497206-3498205 Populus trichocarpa
Potri.006G048700 2.0kb upstream 2.0kb upstream 4939 true Chr06: 3492267-3497205 Populus trichocarpa
Potri.006G048700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3492267-3494266 Populus trichocarpa
Potri.006G048700 2.0kb downstream 2.0kb downstream 4939 true Chr06: 3494267-3499205 Populus trichocarpa
Potri.006G048700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3497206-3499205 Populus trichocarpa
Potri.006G048700 5.0kb upstream 5.0kb upstream 7939 true Chr06: 3489267-3497205 Populus trichocarpa
Potri.006G048700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3489267-3494266 Populus trichocarpa
Potri.006G048700 5.0kb downstream 5.0kb downstream 7939 true Chr06: 3494267-3502205 Populus trichocarpa
Potri.006G048700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3497206-3502205 Populus trichocarpa
Potri.006G048700 10.0kb upstream 10.0kb upstream 12939 true Chr06: 3484267-3497205 Populus trichocarpa
Potri.006G048700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3484267-3494266 Populus trichocarpa
Potri.006G048700 10.0kb downstream 10.0kb downstream 12939 true Chr06: 3494267-3507205 Populus trichocarpa
Potri.006G048700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3497206-3507205 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464279 5262 Malpighiales View MSA
124253386 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain