Gene : Potri.006G050000 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR21576:SF19 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  509
Name:  ? Potri.006G050000 Secondary Identifier:  ? PAC:37242997

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G050000 0.5kb upstream 0.5kb upstream 11251 true Chr06: 3590633-3601883 Populus trichocarpa
Potri.006G050000 0.5kb upstream 0.5kb upstream 500 false Chr06: 3601384-3601883 Populus trichocarpa
Potri.006G050000 0.5kb downstream 0.5kb downstream 11251 true Chr06: 3590133-3601383 Populus trichocarpa
Potri.006G050000 0.5kb downstream 0.5kb downstream 500 false Chr06: 3590133-3590632 Populus trichocarpa
Potri.006G050000 1.0kb upstream 1.0kb upstream 11751 true Chr06: 3590633-3602383 Populus trichocarpa
Potri.006G050000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3601384-3602383 Populus trichocarpa
Potri.006G050000 1.0kb downstream 1.0kb downstream 11751 true Chr06: 3589633-3601383 Populus trichocarpa
Potri.006G050000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3589633-3590632 Populus trichocarpa
Potri.006G050000 2.0kb upstream 2.0kb upstream 12751 true Chr06: 3590633-3603383 Populus trichocarpa
Potri.006G050000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3601384-3603383 Populus trichocarpa
Potri.006G050000 2.0kb downstream 2.0kb downstream 12751 true Chr06: 3588633-3601383 Populus trichocarpa
Potri.006G050000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3588633-3590632 Populus trichocarpa
Potri.006G050000 5.0kb upstream 5.0kb upstream 15751 true Chr06: 3590633-3606383 Populus trichocarpa
Potri.006G050000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3601384-3606383 Populus trichocarpa
Potri.006G050000 5.0kb downstream 5.0kb downstream 15751 true Chr06: 3585633-3601383 Populus trichocarpa
Potri.006G050000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3585633-3590632 Populus trichocarpa
Potri.006G050000 10.0kb upstream 10.0kb upstream 20751 true Chr06: 3590633-3611383 Populus trichocarpa
Potri.006G050000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3601384-3611383 Populus trichocarpa
Potri.006G050000 10.0kb downstream 10.0kb downstream 20751 true Chr06: 3580633-3601383 Populus trichocarpa
Potri.006G050000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3580633-3590632 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452816 5262 Malpighiales View MSA
124241561 5268 Malvidae View MSA
124064000 5270 Rosid View MSA
123738418 5271 Pentapetalae View MSA
122786075 5272 Eudicot View MSA
122044020 5273 Angiosperm View MSA
121310227 5274 Embryophyte View MSA
123347775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain