Gene : Potri.006G036800 P. trichocarpa v3.1
Defline:  (1 of 3) K01640 - hydroxymethylglutaryl-CoA lyase (E4.1.3.4, HMGCL, hmgL) Genomic Order:  376
Name:  ? Potri.006G036800 Secondary Identifier:  ? PAC:37244744
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa LEU-DEG2-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G036800 0.5kb upstream 0.5kb upstream 6995 true Chr06: 2519477-2526471 Populus trichocarpa
Potri.006G036800 0.5kb upstream 0.5kb upstream 500 false Chr06: 2525972-2526471 Populus trichocarpa
Potri.006G036800 0.5kb downstream 0.5kb downstream 6995 true Chr06: 2518977-2525971 Populus trichocarpa
Potri.006G036800 0.5kb downstream 0.5kb downstream 500 false Chr06: 2518977-2519476 Populus trichocarpa
Potri.006G036800 1.0kb upstream 1.0kb upstream 7495 true Chr06: 2519477-2526971 Populus trichocarpa
Potri.006G036800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2525972-2526971 Populus trichocarpa
Potri.006G036800 1.0kb downstream 1.0kb downstream 7495 true Chr06: 2518477-2525971 Populus trichocarpa
Potri.006G036800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2518477-2519476 Populus trichocarpa
Potri.006G036800 2.0kb upstream 2.0kb upstream 8495 true Chr06: 2519477-2527971 Populus trichocarpa
Potri.006G036800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2525972-2527971 Populus trichocarpa
Potri.006G036800 2.0kb downstream 2.0kb downstream 8495 true Chr06: 2517477-2525971 Populus trichocarpa
Potri.006G036800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2517477-2519476 Populus trichocarpa
Potri.006G036800 5.0kb upstream 5.0kb upstream 11495 true Chr06: 2519477-2530971 Populus trichocarpa
Potri.006G036800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2525972-2530971 Populus trichocarpa
Potri.006G036800 5.0kb downstream 5.0kb downstream 11495 true Chr06: 2514477-2525971 Populus trichocarpa
Potri.006G036800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2514477-2519476 Populus trichocarpa
Potri.006G036800 10.0kb upstream 10.0kb upstream 16495 true Chr06: 2519477-2535971 Populus trichocarpa
Potri.006G036800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2525972-2535971 Populus trichocarpa
Potri.006G036800 10.0kb downstream 10.0kb downstream 16495 true Chr06: 2509477-2525971 Populus trichocarpa
Potri.006G036800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2509477-2519476 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461606 5262 Malpighiales View MSA
124245610 5268 Malvidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain