Gene : Potri.006G038400 P. trichocarpa v3.1
Defline:  (1 of 2) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase Genomic Order:  392
Name:  ? Potri.006G038400 Secondary Identifier:  ? PAC:37244475
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CITRULBIO-PWY Populus trichocarpa pathologic  
Ptrichocarpa GLUTAMINDEG-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3282 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4341 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6549 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6964 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G038400 0.5kb upstream 0.5kb upstream 16454 true Chr06: 2689811-2706264 Populus trichocarpa
Potri.006G038400 0.5kb upstream 0.5kb upstream 500 false Chr06: 2705765-2706264 Populus trichocarpa
Potri.006G038400 0.5kb downstream 0.5kb downstream 16454 true Chr06: 2689311-2705764 Populus trichocarpa
Potri.006G038400 0.5kb downstream 0.5kb downstream 500 false Chr06: 2689311-2689810 Populus trichocarpa
Potri.006G038400 1.0kb upstream 1.0kb upstream 16954 true Chr06: 2689811-2706764 Populus trichocarpa
Potri.006G038400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2705765-2706764 Populus trichocarpa
Potri.006G038400 1.0kb downstream 1.0kb downstream 16954 true Chr06: 2688811-2705764 Populus trichocarpa
Potri.006G038400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2688811-2689810 Populus trichocarpa
Potri.006G038400 2.0kb upstream 2.0kb upstream 17954 true Chr06: 2689811-2707764 Populus trichocarpa
Potri.006G038400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2705765-2707764 Populus trichocarpa
Potri.006G038400 2.0kb downstream 2.0kb downstream 17954 true Chr06: 2687811-2705764 Populus trichocarpa
Potri.006G038400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2687811-2689810 Populus trichocarpa
Potri.006G038400 5.0kb upstream 5.0kb upstream 20954 true Chr06: 2689811-2710764 Populus trichocarpa
Potri.006G038400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2705765-2710764 Populus trichocarpa
Potri.006G038400 5.0kb downstream 5.0kb downstream 20954 true Chr06: 2684811-2705764 Populus trichocarpa
Potri.006G038400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2684811-2689810 Populus trichocarpa
Potri.006G038400 10.0kb upstream 10.0kb upstream 25954 true Chr06: 2689811-2715764 Populus trichocarpa
Potri.006G038400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2705765-2715764 Populus trichocarpa
Potri.006G038400 10.0kb downstream 10.0kb downstream 25954 true Chr06: 2679811-2705764 Populus trichocarpa
Potri.006G038400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2679811-2689810 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041031 5273 Angiosperm View MSA
122454746 5262 Malpighiales View MSA
124239263 5268 Malvidae View MSA
124064283 5270 Rosid View MSA
123736436 5271 Pentapetalae View MSA
122793515 5272 Eudicot View MSA
121351458 5274 Embryophyte View MSA
123425051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain