Gene : Potri.006G040600 P. trichocarpa v3.1
Defline:  (1 of 2) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Genomic Order:  414
Name:  ? Potri.006G040600 Secondary Identifier:  ? PAC:37245739
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G040600 0.5kb upstream 0.5kb upstream 3419 true Chr06: 2892994-2896412 Populus trichocarpa
Potri.006G040600 0.5kb upstream 0.5kb upstream 500 false Chr06: 2892994-2893493 Populus trichocarpa
Potri.006G040600 0.5kb downstream 0.5kb downstream 3419 true Chr06: 2893494-2896912 Populus trichocarpa
Potri.006G040600 0.5kb downstream 0.5kb downstream 500 false Chr06: 2896413-2896912 Populus trichocarpa
Potri.006G040600 1.0kb upstream 1.0kb upstream 3919 true Chr06: 2892494-2896412 Populus trichocarpa
Potri.006G040600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2892494-2893493 Populus trichocarpa
Potri.006G040600 1.0kb downstream 1.0kb downstream 3919 true Chr06: 2893494-2897412 Populus trichocarpa
Potri.006G040600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2896413-2897412 Populus trichocarpa
Potri.006G040600 2.0kb upstream 2.0kb upstream 4919 true Chr06: 2891494-2896412 Populus trichocarpa
Potri.006G040600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2891494-2893493 Populus trichocarpa
Potri.006G040600 2.0kb downstream 2.0kb downstream 4919 true Chr06: 2893494-2898412 Populus trichocarpa
Potri.006G040600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2896413-2898412 Populus trichocarpa
Potri.006G040600 5.0kb upstream 5.0kb upstream 7919 true Chr06: 2888494-2896412 Populus trichocarpa
Potri.006G040600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2888494-2893493 Populus trichocarpa
Potri.006G040600 5.0kb downstream 5.0kb downstream 7919 true Chr06: 2893494-2901412 Populus trichocarpa
Potri.006G040600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2896413-2901412 Populus trichocarpa
Potri.006G040600 10.0kb upstream 10.0kb upstream 12919 true Chr06: 2883494-2896412 Populus trichocarpa
Potri.006G040600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2883494-2893493 Populus trichocarpa
Potri.006G040600 10.0kb downstream 10.0kb downstream 12919 true Chr06: 2893494-2906412 Populus trichocarpa
Potri.006G040600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2896413-2906412 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461938 5262 Malpighiales View MSA
124247817 5268 Malvidae View MSA
124066897 5270 Rosid View MSA
123749345 5271 Pentapetalae View MSA
122789424 5272 Eudicot View MSA
122046063 5273 Angiosperm View MSA
121345370 5274 Embryophyte View MSA
123425050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain