Gene : Potri.006G042800 P. trichocarpa v3.1

Defline:  (1 of 146) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  435
Name:  ? Potri.006G042800 Secondary Identifier:  ? PAC:37243564

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G042800 0.5kb upstream 0.5kb upstream 2103 true Chr06: 3027169-3029271 Populus trichocarpa
Potri.006G042800 0.5kb upstream 0.5kb upstream 500 false Chr06: 3027169-3027668 Populus trichocarpa
Potri.006G042800 0.5kb downstream 0.5kb downstream 2103 true Chr06: 3027669-3029771 Populus trichocarpa
Potri.006G042800 0.5kb downstream 0.5kb downstream 500 false Chr06: 3029272-3029771 Populus trichocarpa
Potri.006G042800 1.0kb upstream 1.0kb upstream 2603 true Chr06: 3026669-3029271 Populus trichocarpa
Potri.006G042800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3026669-3027668 Populus trichocarpa
Potri.006G042800 1.0kb downstream 1.0kb downstream 2603 true Chr06: 3027669-3030271 Populus trichocarpa
Potri.006G042800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3029272-3030271 Populus trichocarpa
Potri.006G042800 2.0kb upstream 2.0kb upstream 3603 true Chr06: 3025669-3029271 Populus trichocarpa
Potri.006G042800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3025669-3027668 Populus trichocarpa
Potri.006G042800 2.0kb downstream 2.0kb downstream 3603 true Chr06: 3027669-3031271 Populus trichocarpa
Potri.006G042800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3029272-3031271 Populus trichocarpa
Potri.006G042800 5.0kb upstream 5.0kb upstream 6603 true Chr06: 3022669-3029271 Populus trichocarpa
Potri.006G042800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3022669-3027668 Populus trichocarpa
Potri.006G042800 5.0kb downstream 5.0kb downstream 6603 true Chr06: 3027669-3034271 Populus trichocarpa
Potri.006G042800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3029272-3034271 Populus trichocarpa
Potri.006G042800 10.0kb upstream 10.0kb upstream 11603 true Chr06: 3017669-3029271 Populus trichocarpa
Potri.006G042800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3017669-3027668 Populus trichocarpa
Potri.006G042800 10.0kb downstream 10.0kb downstream 11603 true Chr06: 3027669-3039271 Populus trichocarpa
Potri.006G042800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3029272-3039271 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122414491 5262 Malpighiales View MSA
124255137 5268 Malvidae View MSA
124052010 5270 Rosid View MSA
123620379 5271 Pentapetalae View MSA
122654785 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain