Gene : Potri.006G142800 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR22893:SF67 - 12-OXOPHYTODIENOATE REDUCTASE 3 Genomic Order:  1466
Name:  ? Potri.006G142800 Secondary Identifier:  ? PAC:37246242
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-735 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G142800 0.5kb upstream 0.5kb upstream 6749 true Chr06: 12059393-12066141 Populus trichocarpa
Potri.006G142800 0.5kb upstream 0.5kb upstream 500 false Chr06: 12065642-12066141 Populus trichocarpa
Potri.006G142800 0.5kb downstream 0.5kb downstream 6749 true Chr06: 12058893-12065641 Populus trichocarpa
Potri.006G142800 0.5kb downstream 0.5kb downstream 500 false Chr06: 12058893-12059392 Populus trichocarpa
Potri.006G142800 1.0kb upstream 1.0kb upstream 7249 true Chr06: 12059393-12066641 Populus trichocarpa
Potri.006G142800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12065642-12066641 Populus trichocarpa
Potri.006G142800 1.0kb downstream 1.0kb downstream 7249 true Chr06: 12058393-12065641 Populus trichocarpa
Potri.006G142800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12058393-12059392 Populus trichocarpa
Potri.006G142800 2.0kb upstream 2.0kb upstream 8249 true Chr06: 12059393-12067641 Populus trichocarpa
Potri.006G142800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12065642-12067641 Populus trichocarpa
Potri.006G142800 2.0kb downstream 2.0kb downstream 8249 true Chr06: 12057393-12065641 Populus trichocarpa
Potri.006G142800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12057393-12059392 Populus trichocarpa
Potri.006G142800 5.0kb upstream 5.0kb upstream 11249 true Chr06: 12059393-12070641 Populus trichocarpa
Potri.006G142800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12065642-12070641 Populus trichocarpa
Potri.006G142800 5.0kb downstream 5.0kb downstream 11249 true Chr06: 12054393-12065641 Populus trichocarpa
Potri.006G142800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12054393-12059392 Populus trichocarpa
Potri.006G142800 10.0kb upstream 10.0kb upstream 16249 true Chr06: 12059393-12075641 Populus trichocarpa
Potri.006G142800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12065642-12075641 Populus trichocarpa
Potri.006G142800 10.0kb downstream 10.0kb downstream 16249 true Chr06: 12049393-12065641 Populus trichocarpa
Potri.006G142800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12049393-12059392 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456781 5262 Malpighiales View MSA
124251945 5268 Malvidae View MSA
124067438 5270 Rosid View MSA
123752843 5271 Pentapetalae View MSA
122793200 5272 Eudicot View MSA
122045758 5273 Angiosperm View MSA
121351640 5274 Embryophyte View MSA
123428487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain