Gene : Potri.006G119200 P. trichocarpa v3.1

Defline:  (1 of 2) K12185 - ESCRT-I complex subunit VPS37 (VPS37) Genomic Order:  1221
Name:  ? Potri.006G119200 Secondary Identifier:  ? PAC:37245741

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G119200 0.5kb upstream 0.5kb upstream 3580 true Chr06: 9420103-9423682 Populus trichocarpa
Potri.006G119200 0.5kb upstream 0.5kb upstream 500 false Chr06: 9423183-9423682 Populus trichocarpa
Potri.006G119200 0.5kb downstream 0.5kb downstream 3580 true Chr06: 9419603-9423182 Populus trichocarpa
Potri.006G119200 0.5kb downstream 0.5kb downstream 500 false Chr06: 9419603-9420102 Populus trichocarpa
Potri.006G119200 1.0kb upstream 1.0kb upstream 4080 true Chr06: 9420103-9424182 Populus trichocarpa
Potri.006G119200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9423183-9424182 Populus trichocarpa
Potri.006G119200 1.0kb downstream 1.0kb downstream 4080 true Chr06: 9419103-9423182 Populus trichocarpa
Potri.006G119200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9419103-9420102 Populus trichocarpa
Potri.006G119200 2.0kb upstream 2.0kb upstream 5080 true Chr06: 9420103-9425182 Populus trichocarpa
Potri.006G119200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9423183-9425182 Populus trichocarpa
Potri.006G119200 2.0kb downstream 2.0kb downstream 5080 true Chr06: 9418103-9423182 Populus trichocarpa
Potri.006G119200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9418103-9420102 Populus trichocarpa
Potri.006G119200 5.0kb upstream 5.0kb upstream 8080 true Chr06: 9420103-9428182 Populus trichocarpa
Potri.006G119200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9423183-9428182 Populus trichocarpa
Potri.006G119200 5.0kb downstream 5.0kb downstream 8080 true Chr06: 9415103-9423182 Populus trichocarpa
Potri.006G119200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9415103-9420102 Populus trichocarpa
Potri.006G119200 10.0kb upstream 10.0kb upstream 13080 true Chr06: 9420103-9433182 Populus trichocarpa
Potri.006G119200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9423183-9433182 Populus trichocarpa
Potri.006G119200 10.0kb downstream 10.0kb downstream 13080 true Chr06: 9410103-9423182 Populus trichocarpa
Potri.006G119200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9410103-9420102 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456922 5262 Malpighiales View MSA
124249819 5268 Malvidae View MSA
124068328 5270 Rosid View MSA
123746105 5271 Pentapetalae View MSA
122791757 5272 Eudicot View MSA
122041656 5273 Angiosperm View MSA
121345177 5274 Embryophyte View MSA
123424411 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain