Gene : Potri.006G110800 P. trichocarpa v3.1
Defline:  (1 of 3) K02730 - 20S proteasome subunit alpha 1 (PSMA6) Genomic Order:  1135
Name:  ? Potri.006G110800 Secondary Identifier:  ? PAC:37244682
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G110800 0.5kb upstream 0.5kb upstream 4022 true Chr06: 8644403-8648424 Populus trichocarpa
Potri.006G110800 0.5kb upstream 0.5kb upstream 500 false Chr06: 8644403-8644902 Populus trichocarpa
Potri.006G110800 0.5kb downstream 0.5kb downstream 4022 true Chr06: 8644903-8648924 Populus trichocarpa
Potri.006G110800 0.5kb downstream 0.5kb downstream 500 false Chr06: 8648425-8648924 Populus trichocarpa
Potri.006G110800 1.0kb upstream 1.0kb upstream 4522 true Chr06: 8643903-8648424 Populus trichocarpa
Potri.006G110800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8643903-8644902 Populus trichocarpa
Potri.006G110800 1.0kb downstream 1.0kb downstream 4522 true Chr06: 8644903-8649424 Populus trichocarpa
Potri.006G110800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8648425-8649424 Populus trichocarpa
Potri.006G110800 2.0kb upstream 2.0kb upstream 5522 true Chr06: 8642903-8648424 Populus trichocarpa
Potri.006G110800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8642903-8644902 Populus trichocarpa
Potri.006G110800 2.0kb downstream 2.0kb downstream 5522 true Chr06: 8644903-8650424 Populus trichocarpa
Potri.006G110800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8648425-8650424 Populus trichocarpa
Potri.006G110800 5.0kb upstream 5.0kb upstream 8522 true Chr06: 8639903-8648424 Populus trichocarpa
Potri.006G110800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8639903-8644902 Populus trichocarpa
Potri.006G110800 5.0kb downstream 5.0kb downstream 8522 true Chr06: 8644903-8653424 Populus trichocarpa
Potri.006G110800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8648425-8653424 Populus trichocarpa
Potri.006G110800 10.0kb upstream 10.0kb upstream 13522 true Chr06: 8634903-8648424 Populus trichocarpa
Potri.006G110800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8634903-8644902 Populus trichocarpa
Potri.006G110800 10.0kb downstream 10.0kb downstream 13522 true Chr06: 8644903-8658424 Populus trichocarpa
Potri.006G110800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8648425-8658424 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041382 5273 Angiosperm View MSA
122414282 5262 Malpighiales View MSA
124207569 5268 Malvidae View MSA
123926221 5270 Rosid View MSA
123742081 5271 Pentapetalae View MSA
122789367 5272 Eudicot View MSA
121345997 5274 Embryophyte View MSA
123424581 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain