Gene : Potri.006G196200 P. trichocarpa v3.1
Defline:  (1 of 1) K04716 - sphingosine-1-phosphate phosphatase 1 (SGPP1) Genomic Order:  2016
Name:  ? Potri.006G196200 Secondary Identifier:  ? PAC:37244809
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRIGLSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G196200 0.5kb upstream 0.5kb upstream 5785 true Chr06: 21202541-21208325 Populus trichocarpa
Potri.006G196200 0.5kb upstream 0.5kb upstream 500 false Chr06: 21207826-21208325 Populus trichocarpa
Potri.006G196200 0.5kb downstream 0.5kb downstream 5785 true Chr06: 21202041-21207825 Populus trichocarpa
Potri.006G196200 0.5kb downstream 0.5kb downstream 500 false Chr06: 21202041-21202540 Populus trichocarpa
Potri.006G196200 1.0kb upstream 1.0kb upstream 6285 true Chr06: 21202541-21208825 Populus trichocarpa
Potri.006G196200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21207826-21208825 Populus trichocarpa
Potri.006G196200 1.0kb downstream 1.0kb downstream 6285 true Chr06: 21201541-21207825 Populus trichocarpa
Potri.006G196200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21201541-21202540 Populus trichocarpa
Potri.006G196200 2.0kb upstream 2.0kb upstream 7285 true Chr06: 21202541-21209825 Populus trichocarpa
Potri.006G196200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21207826-21209825 Populus trichocarpa
Potri.006G196200 2.0kb downstream 2.0kb downstream 7285 true Chr06: 21200541-21207825 Populus trichocarpa
Potri.006G196200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21200541-21202540 Populus trichocarpa
Potri.006G196200 5.0kb upstream 5.0kb upstream 10285 true Chr06: 21202541-21212825 Populus trichocarpa
Potri.006G196200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21207826-21212825 Populus trichocarpa
Potri.006G196200 5.0kb downstream 5.0kb downstream 10285 true Chr06: 21197541-21207825 Populus trichocarpa
Potri.006G196200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21197541-21202540 Populus trichocarpa
Potri.006G196200 10.0kb upstream 10.0kb upstream 15285 true Chr06: 21202541-21217825 Populus trichocarpa
Potri.006G196200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21207826-21217825 Populus trichocarpa
Potri.006G196200 10.0kb downstream 10.0kb downstream 15285 true Chr06: 21192541-21207825 Populus trichocarpa
Potri.006G196200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21192541-21202540 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453076 5262 Malpighiales View MSA
124241602 5268 Malvidae View MSA
124061101 5270 Rosid View MSA
123739708 5271 Pentapetalae View MSA
122787223 5272 Eudicot View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain