Gene : Potri.006G200100 P. trichocarpa v3.1

Defline:  (1 of 4) PTHR33264//PTHR33264:SF5 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED Genomic Order:  2058
Name:  ? Potri.006G200100 Secondary Identifier:  ? PAC:37244146

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G200100 0.5kb upstream 0.5kb upstream 1633 true Chr06: 21522903-21524535 Populus trichocarpa
Potri.006G200100 0.5kb upstream 0.5kb upstream 500 false Chr06: 21522903-21523402 Populus trichocarpa
Potri.006G200100 0.5kb downstream 0.5kb downstream 1633 true Chr06: 21523403-21525035 Populus trichocarpa
Potri.006G200100 0.5kb downstream 0.5kb downstream 500 false Chr06: 21524536-21525035 Populus trichocarpa
Potri.006G200100 1.0kb upstream 1.0kb upstream 2133 true Chr06: 21522403-21524535 Populus trichocarpa
Potri.006G200100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21522403-21523402 Populus trichocarpa
Potri.006G200100 1.0kb downstream 1.0kb downstream 2133 true Chr06: 21523403-21525535 Populus trichocarpa
Potri.006G200100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21524536-21525535 Populus trichocarpa
Potri.006G200100 2.0kb upstream 2.0kb upstream 3133 true Chr06: 21521403-21524535 Populus trichocarpa
Potri.006G200100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21521403-21523402 Populus trichocarpa
Potri.006G200100 2.0kb downstream 2.0kb downstream 3133 true Chr06: 21523403-21526535 Populus trichocarpa
Potri.006G200100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21524536-21526535 Populus trichocarpa
Potri.006G200100 5.0kb upstream 5.0kb upstream 6133 true Chr06: 21518403-21524535 Populus trichocarpa
Potri.006G200100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21518403-21523402 Populus trichocarpa
Potri.006G200100 5.0kb downstream 5.0kb downstream 6133 true Chr06: 21523403-21529535 Populus trichocarpa
Potri.006G200100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21524536-21529535 Populus trichocarpa
Potri.006G200100 10.0kb upstream 10.0kb upstream 11133 true Chr06: 21513403-21524535 Populus trichocarpa
Potri.006G200100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21513403-21523402 Populus trichocarpa
Potri.006G200100 10.0kb downstream 10.0kb downstream 11133 true Chr06: 21523403-21534535 Populus trichocarpa
Potri.006G200100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21524536-21534535 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458830 5262 Malpighiales View MSA
124247277 5268 Malvidae View MSA
124063253 5270 Rosid View MSA
123746370 5271 Pentapetalae View MSA
122792575 5272 Eudicot View MSA
122043918 5273 Angiosperm View MSA
121310210 5274 Embryophyte View MSA
123347762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain