Gene : Potri.006G162600 P. trichocarpa v3.1
Defline:  (1 of 64) PTHR31286:SF2 - TA11-LIKE NON-LTR RETROELEMENT PROTEIN-RELATED Genomic Order:  1666
Name:  ? Potri.006G162600 Secondary Identifier:  ? PAC:37243118
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G162600 0.5kb upstream 0.5kb upstream 1694 true Chr06: 16052348-16054041 Populus trichocarpa
Potri.006G162600 0.5kb upstream 0.5kb upstream 500 false Chr06: 16052348-16052847 Populus trichocarpa
Potri.006G162600 0.5kb downstream 0.5kb downstream 1694 true Chr06: 16052848-16054541 Populus trichocarpa
Potri.006G162600 0.5kb downstream 0.5kb downstream 500 false Chr06: 16054042-16054541 Populus trichocarpa
Potri.006G162600 1.0kb upstream 1.0kb upstream 2194 true Chr06: 16051848-16054041 Populus trichocarpa
Potri.006G162600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16051848-16052847 Populus trichocarpa
Potri.006G162600 1.0kb downstream 1.0kb downstream 2194 true Chr06: 16052848-16055041 Populus trichocarpa
Potri.006G162600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16054042-16055041 Populus trichocarpa
Potri.006G162600 2.0kb upstream 2.0kb upstream 3194 true Chr06: 16050848-16054041 Populus trichocarpa
Potri.006G162600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16050848-16052847 Populus trichocarpa
Potri.006G162600 2.0kb downstream 2.0kb downstream 3194 true Chr06: 16052848-16056041 Populus trichocarpa
Potri.006G162600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16054042-16056041 Populus trichocarpa
Potri.006G162600 5.0kb upstream 5.0kb upstream 6194 true Chr06: 16047848-16054041 Populus trichocarpa
Potri.006G162600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16047848-16052847 Populus trichocarpa
Potri.006G162600 5.0kb downstream 5.0kb downstream 6194 true Chr06: 16052848-16059041 Populus trichocarpa
Potri.006G162600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16054042-16059041 Populus trichocarpa
Potri.006G162600 10.0kb upstream 10.0kb upstream 11194 true Chr06: 16042848-16054041 Populus trichocarpa
Potri.006G162600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16042848-16052847 Populus trichocarpa
Potri.006G162600 10.0kb downstream 10.0kb downstream 11194 true Chr06: 16052848-16064041 Populus trichocarpa
Potri.006G162600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16054042-16064041 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122406093 5262 Malpighiales View MSA
124252780 5268 Malvidae View MSA
124051495 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain