Gene : Potri.006G147300 P. trichocarpa v3.1
Defline:  (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase Genomic Order:  1513
Name:  ? Potri.006G147300 Secondary Identifier:  ? PAC:37246164
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CAROTENOID-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5175 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5946 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G147300 0.5kb upstream 0.5kb upstream 11212 true Chr06: 12639444-12650655 Populus trichocarpa
Potri.006G147300 0.5kb upstream 0.5kb upstream 500 false Chr06: 12650156-12650655 Populus trichocarpa
Potri.006G147300 0.5kb downstream 0.5kb downstream 11212 true Chr06: 12638944-12650155 Populus trichocarpa
Potri.006G147300 0.5kb downstream 0.5kb downstream 500 false Chr06: 12638944-12639443 Populus trichocarpa
Potri.006G147300 1.0kb upstream 1.0kb upstream 11712 true Chr06: 12639444-12651155 Populus trichocarpa
Potri.006G147300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12650156-12651155 Populus trichocarpa
Potri.006G147300 1.0kb downstream 1.0kb downstream 11712 true Chr06: 12638444-12650155 Populus trichocarpa
Potri.006G147300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12638444-12639443 Populus trichocarpa
Potri.006G147300 2.0kb upstream 2.0kb upstream 12712 true Chr06: 12639444-12652155 Populus trichocarpa
Potri.006G147300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12650156-12652155 Populus trichocarpa
Potri.006G147300 2.0kb downstream 2.0kb downstream 12712 true Chr06: 12637444-12650155 Populus trichocarpa
Potri.006G147300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12637444-12639443 Populus trichocarpa
Potri.006G147300 5.0kb upstream 5.0kb upstream 15712 true Chr06: 12639444-12655155 Populus trichocarpa
Potri.006G147300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12650156-12655155 Populus trichocarpa
Potri.006G147300 5.0kb downstream 5.0kb downstream 15712 true Chr06: 12634444-12650155 Populus trichocarpa
Potri.006G147300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12634444-12639443 Populus trichocarpa
Potri.006G147300 10.0kb upstream 10.0kb upstream 20712 true Chr06: 12639444-12660155 Populus trichocarpa
Potri.006G147300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12650156-12660155 Populus trichocarpa
Potri.006G147300 10.0kb downstream 10.0kb downstream 20712 true Chr06: 12629444-12650155 Populus trichocarpa
Potri.006G147300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12629444-12639443 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458416 5262 Malpighiales View MSA
124243060 5268 Malvidae View MSA
124068333 5270 Rosid View MSA
123739919 5271 Pentapetalae View MSA
122791667 5272 Eudicot View MSA
122041543 5273 Angiosperm View MSA
121345455 5274 Embryophyte View MSA
123424108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain