Gene : Potri.006G252900 P. trichocarpa v3.1
Defline:  (1 of 80) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  2605
Name:  ? Potri.006G252900 Secondary Identifier:  ? PAC:37245945
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G252900 0.5kb upstream 0.5kb upstream 4527 true Chr06: 25828818-25833344 Populus trichocarpa
Potri.006G252900 0.5kb upstream 0.5kb upstream 500 false Chr06: 25832845-25833344 Populus trichocarpa
Potri.006G252900 0.5kb downstream 0.5kb downstream 4527 true Chr06: 25828318-25832844 Populus trichocarpa
Potri.006G252900 0.5kb downstream 0.5kb downstream 500 false Chr06: 25828318-25828817 Populus trichocarpa
Potri.006G252900 1.0kb upstream 1.0kb upstream 5027 true Chr06: 25828818-25833844 Populus trichocarpa
Potri.006G252900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25832845-25833844 Populus trichocarpa
Potri.006G252900 1.0kb downstream 1.0kb downstream 5027 true Chr06: 25827818-25832844 Populus trichocarpa
Potri.006G252900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25827818-25828817 Populus trichocarpa
Potri.006G252900 2.0kb upstream 2.0kb upstream 6027 true Chr06: 25828818-25834844 Populus trichocarpa
Potri.006G252900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25832845-25834844 Populus trichocarpa
Potri.006G252900 2.0kb downstream 2.0kb downstream 6027 true Chr06: 25826818-25832844 Populus trichocarpa
Potri.006G252900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25826818-25828817 Populus trichocarpa
Potri.006G252900 5.0kb upstream 5.0kb upstream 9027 true Chr06: 25828818-25837844 Populus trichocarpa
Potri.006G252900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25832845-25837844 Populus trichocarpa
Potri.006G252900 5.0kb downstream 5.0kb downstream 9027 true Chr06: 25823818-25832844 Populus trichocarpa
Potri.006G252900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25823818-25828817 Populus trichocarpa
Potri.006G252900 10.0kb upstream 10.0kb upstream 14027 true Chr06: 25828818-25842844 Populus trichocarpa
Potri.006G252900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25832845-25842844 Populus trichocarpa
Potri.006G252900 10.0kb downstream 10.0kb downstream 14027 true Chr06: 25818818-25832844 Populus trichocarpa
Potri.006G252900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25818818-25828817 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460549 5262 Malpighiales View MSA
124249641 5268 Malvidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain