Gene : Potri.006G246500 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR31407:SF7 - PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC Genomic Order:  2540
Name:  ? Potri.006G246500 Secondary Identifier:  ? PAC:37243794
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-101 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G246500 0.5kb upstream 0.5kb upstream 3746 true Chr06: 25381446-25385191 Populus trichocarpa
Potri.006G246500 0.5kb upstream 0.5kb upstream 500 false Chr06: 25384692-25385191 Populus trichocarpa
Potri.006G246500 0.5kb downstream 0.5kb downstream 3746 true Chr06: 25380946-25384691 Populus trichocarpa
Potri.006G246500 0.5kb downstream 0.5kb downstream 500 false Chr06: 25380946-25381445 Populus trichocarpa
Potri.006G246500 1.0kb upstream 1.0kb upstream 4246 true Chr06: 25381446-25385691 Populus trichocarpa
Potri.006G246500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25384692-25385691 Populus trichocarpa
Potri.006G246500 1.0kb downstream 1.0kb downstream 4246 true Chr06: 25380446-25384691 Populus trichocarpa
Potri.006G246500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25380446-25381445 Populus trichocarpa
Potri.006G246500 2.0kb upstream 2.0kb upstream 5246 true Chr06: 25381446-25386691 Populus trichocarpa
Potri.006G246500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25384692-25386691 Populus trichocarpa
Potri.006G246500 2.0kb downstream 2.0kb downstream 5246 true Chr06: 25379446-25384691 Populus trichocarpa
Potri.006G246500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25379446-25381445 Populus trichocarpa
Potri.006G246500 5.0kb upstream 5.0kb upstream 8246 true Chr06: 25381446-25389691 Populus trichocarpa
Potri.006G246500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25384692-25389691 Populus trichocarpa
Potri.006G246500 5.0kb downstream 5.0kb downstream 8246 true Chr06: 25376446-25384691 Populus trichocarpa
Potri.006G246500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25376446-25381445 Populus trichocarpa
Potri.006G246500 10.0kb upstream 10.0kb upstream 13246 true Chr06: 25381446-25394691 Populus trichocarpa
Potri.006G246500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25384692-25394691 Populus trichocarpa
Potri.006G246500 10.0kb downstream 10.0kb downstream 13246 true Chr06: 25371446-25384691 Populus trichocarpa
Potri.006G246500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25371446-25381445 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451252 5262 Malpighiales View MSA
124241336 5268 Malvidae View MSA
124062486 5270 Rosid View MSA
123736940 5271 Pentapetalae View MSA
122792817 5272 Eudicot View MSA
122045870 5273 Angiosperm View MSA
121347202 5274 Embryophyte View MSA
123425599 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain