Gene : Potri.006G219900 P. trichocarpa v3.1
Defline:  (1 of 1) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  2259
Name:  ? Potri.006G219900 Secondary Identifier:  ? PAC:37244810
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-4361 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7270 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7528 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G219900 0.5kb upstream 0.5kb upstream 3995 true Chr06: 23227960-23231954 Populus trichocarpa
Potri.006G219900 0.5kb upstream 0.5kb upstream 500 false Chr06: 23227960-23228459 Populus trichocarpa
Potri.006G219900 0.5kb downstream 0.5kb downstream 3995 true Chr06: 23228460-23232454 Populus trichocarpa
Potri.006G219900 0.5kb downstream 0.5kb downstream 500 false Chr06: 23231955-23232454 Populus trichocarpa
Potri.006G219900 1.0kb upstream 1.0kb upstream 4495 true Chr06: 23227460-23231954 Populus trichocarpa
Potri.006G219900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23227460-23228459 Populus trichocarpa
Potri.006G219900 1.0kb downstream 1.0kb downstream 4495 true Chr06: 23228460-23232954 Populus trichocarpa
Potri.006G219900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23231955-23232954 Populus trichocarpa
Potri.006G219900 2.0kb upstream 2.0kb upstream 5495 true Chr06: 23226460-23231954 Populus trichocarpa
Potri.006G219900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23226460-23228459 Populus trichocarpa
Potri.006G219900 2.0kb downstream 2.0kb downstream 5495 true Chr06: 23228460-23233954 Populus trichocarpa
Potri.006G219900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23231955-23233954 Populus trichocarpa
Potri.006G219900 5.0kb upstream 5.0kb upstream 8495 true Chr06: 23223460-23231954 Populus trichocarpa
Potri.006G219900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23223460-23228459 Populus trichocarpa
Potri.006G219900 5.0kb downstream 5.0kb downstream 8495 true Chr06: 23228460-23236954 Populus trichocarpa
Potri.006G219900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23231955-23236954 Populus trichocarpa
Potri.006G219900 10.0kb upstream 10.0kb upstream 13495 true Chr06: 23218460-23231954 Populus trichocarpa
Potri.006G219900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23218460-23228459 Populus trichocarpa
Potri.006G219900 10.0kb downstream 10.0kb downstream 13495 true Chr06: 23228460-23241954 Populus trichocarpa
Potri.006G219900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23231955-23241954 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454524 5262 Malpighiales View MSA
124238790 5268 Malvidae View MSA
124060423 5270 Rosid View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain