Gene : Potri.006G224500 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR11533//PTHR11533:SF189 - PROTEASE M1 ZINC METALLOPROTEASE // SUBFAMILY NOT NAMED Genomic Order:  2307
Name:  ? Potri.006G224500 Secondary Identifier:  ? PAC:37242886
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6842 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G224500 0.5kb upstream 0.5kb upstream 6209 true Chr06: 23637916-23644124 Populus trichocarpa
Potri.006G224500 0.5kb upstream 0.5kb upstream 500 false Chr06: 23637916-23638415 Populus trichocarpa
Potri.006G224500 0.5kb downstream 0.5kb downstream 6209 true Chr06: 23638416-23644624 Populus trichocarpa
Potri.006G224500 0.5kb downstream 0.5kb downstream 500 false Chr06: 23644125-23644624 Populus trichocarpa
Potri.006G224500 1.0kb upstream 1.0kb upstream 6709 true Chr06: 23637416-23644124 Populus trichocarpa
Potri.006G224500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23637416-23638415 Populus trichocarpa
Potri.006G224500 1.0kb downstream 1.0kb downstream 6709 true Chr06: 23638416-23645124 Populus trichocarpa
Potri.006G224500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23644125-23645124 Populus trichocarpa
Potri.006G224500 2.0kb upstream 2.0kb upstream 7709 true Chr06: 23636416-23644124 Populus trichocarpa
Potri.006G224500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23636416-23638415 Populus trichocarpa
Potri.006G224500 2.0kb downstream 2.0kb downstream 7709 true Chr06: 23638416-23646124 Populus trichocarpa
Potri.006G224500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23644125-23646124 Populus trichocarpa
Potri.006G224500 5.0kb upstream 5.0kb upstream 10709 true Chr06: 23633416-23644124 Populus trichocarpa
Potri.006G224500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23633416-23638415 Populus trichocarpa
Potri.006G224500 5.0kb downstream 5.0kb downstream 10709 true Chr06: 23638416-23649124 Populus trichocarpa
Potri.006G224500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23644125-23649124 Populus trichocarpa
Potri.006G224500 10.0kb upstream 10.0kb upstream 15709 true Chr06: 23628416-23644124 Populus trichocarpa
Potri.006G224500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23628416-23638415 Populus trichocarpa
Potri.006G224500 10.0kb downstream 10.0kb downstream 15709 true Chr06: 23638416-23654124 Populus trichocarpa
Potri.006G224500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23644125-23654124 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451911 5262 Malpighiales View MSA
124239309 5268 Malvidae View MSA
124064231 5270 Rosid View MSA
123745445 5271 Pentapetalae View MSA
122791441 5272 Eudicot View MSA
122045992 5273 Angiosperm View MSA
121349880 5274 Embryophyte View MSA
123428340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain