Gene : Potri.007G004100 P. trichocarpa v3.1
Defline:  (1 of 3) K01873 - valyl-tRNA synthetase (VARS, valS) Genomic Order:  42
Name:  ? Potri.007G004100 Secondary Identifier:  ? PAC:37252951
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G004100 0.5kb upstream 0.5kb upstream 10575 true Chr07: 301142-311716 Populus trichocarpa
Potri.007G004100 0.5kb upstream 0.5kb upstream 500 false Chr07: 301142-301641 Populus trichocarpa
Potri.007G004100 0.5kb downstream 0.5kb downstream 10575 true Chr07: 301642-312216 Populus trichocarpa
Potri.007G004100 0.5kb downstream 0.5kb downstream 500 false Chr07: 311717-312216 Populus trichocarpa
Potri.007G004100 1.0kb upstream 1.0kb upstream 11075 true Chr07: 300642-311716 Populus trichocarpa
Potri.007G004100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 300642-301641 Populus trichocarpa
Potri.007G004100 1.0kb downstream 1.0kb downstream 11075 true Chr07: 301642-312716 Populus trichocarpa
Potri.007G004100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 311717-312716 Populus trichocarpa
Potri.007G004100 2.0kb upstream 2.0kb upstream 12075 true Chr07: 299642-311716 Populus trichocarpa
Potri.007G004100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 299642-301641 Populus trichocarpa
Potri.007G004100 2.0kb downstream 2.0kb downstream 12075 true Chr07: 301642-313716 Populus trichocarpa
Potri.007G004100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 311717-313716 Populus trichocarpa
Potri.007G004100 5.0kb upstream 5.0kb upstream 15075 true Chr07: 296642-311716 Populus trichocarpa
Potri.007G004100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 296642-301641 Populus trichocarpa
Potri.007G004100 5.0kb downstream 5.0kb downstream 15075 true Chr07: 301642-316716 Populus trichocarpa
Potri.007G004100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 311717-316716 Populus trichocarpa
Potri.007G004100 10.0kb upstream 10.0kb upstream 20075 true Chr07: 291642-311716 Populus trichocarpa
Potri.007G004100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 291642-301641 Populus trichocarpa
Potri.007G004100 10.0kb downstream 10.0kb downstream 20075 true Chr07: 301642-321716 Populus trichocarpa
Potri.007G004100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 311717-321716 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457267 5262 Malpighiales View MSA
124237752 5268 Malvidae View MSA
124066992 5270 Rosid View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain