Gene : Potri.006G279000 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR12192//PTHR12192:SF10 - CATION TRANSPORT PROTEIN CHAC-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2881
Name:  ? Potri.006G279000 Secondary Identifier:  ? PAC:37242543
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G279000 0.5kb upstream 0.5kb upstream 3597 true Chr06: 27749388-27752984 Populus trichocarpa
Potri.006G279000 0.5kb upstream 0.5kb upstream 500 false Chr06: 27752485-27752984 Populus trichocarpa
Potri.006G279000 0.5kb downstream 0.5kb downstream 3597 true Chr06: 27748888-27752484 Populus trichocarpa
Potri.006G279000 0.5kb downstream 0.5kb downstream 500 false Chr06: 27748888-27749387 Populus trichocarpa
Potri.006G279000 1.0kb upstream 1.0kb upstream 4097 true Chr06: 27749388-27753484 Populus trichocarpa
Potri.006G279000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27752485-27753484 Populus trichocarpa
Potri.006G279000 1.0kb downstream 1.0kb downstream 4097 true Chr06: 27748388-27752484 Populus trichocarpa
Potri.006G279000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27748388-27749387 Populus trichocarpa
Potri.006G279000 2.0kb upstream 2.0kb upstream 5097 true Chr06: 27749388-27754484 Populus trichocarpa
Potri.006G279000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27752485-27754484 Populus trichocarpa
Potri.006G279000 2.0kb downstream 2.0kb downstream 5097 true Chr06: 27747388-27752484 Populus trichocarpa
Potri.006G279000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27747388-27749387 Populus trichocarpa
Potri.006G279000 5.0kb upstream 5.0kb upstream 8097 true Chr06: 27749388-27757484 Populus trichocarpa
Potri.006G279000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27752485-27757484 Populus trichocarpa
Potri.006G279000 5.0kb downstream 5.0kb downstream 8097 true Chr06: 27744388-27752484 Populus trichocarpa
Potri.006G279000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27744388-27749387 Populus trichocarpa
Potri.006G279000 10.0kb upstream 10.0kb upstream 13097 true Chr06: 27749388-27762484 Populus trichocarpa
Potri.006G279000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27752485-27762484 Populus trichocarpa
Potri.006G279000 10.0kb downstream 10.0kb downstream 13097 true Chr06: 27739388-27752484 Populus trichocarpa
Potri.006G279000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27739388-27749387 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456912 5262 Malpighiales View MSA
124239575 5268 Malvidae View MSA
124064696 5270 Rosid View MSA
123751581 5271 Pentapetalae View MSA
122789241 5272 Eudicot View MSA
122047820 5273 Angiosperm View MSA
121346610 5274 Embryophyte View MSA
123426702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain