Gene : Potri.006G278500 P. trichocarpa v3.1
Defline:  (1 of 1) 2.1.1.177 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase / rRNA large subunit methyltransferase H Genomic Order:  2876
Name:  ? Potri.006G278500 Secondary Identifier:  ? PAC:37243027
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G278500 0.5kb upstream 0.5kb upstream 2921 true Chr06: 27729859-27732779 Populus trichocarpa
Potri.006G278500 0.5kb upstream 0.5kb upstream 500 false Chr06: 27732280-27732779 Populus trichocarpa
Potri.006G278500 0.5kb downstream 0.5kb downstream 2921 true Chr06: 27729359-27732279 Populus trichocarpa
Potri.006G278500 0.5kb downstream 0.5kb downstream 500 false Chr06: 27729359-27729858 Populus trichocarpa
Potri.006G278500 1.0kb upstream 1.0kb upstream 3421 true Chr06: 27729859-27733279 Populus trichocarpa
Potri.006G278500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 27732280-27733279 Populus trichocarpa
Potri.006G278500 1.0kb downstream 1.0kb downstream 3421 true Chr06: 27728859-27732279 Populus trichocarpa
Potri.006G278500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 27728859-27729858 Populus trichocarpa
Potri.006G278500 2.0kb upstream 2.0kb upstream 4421 true Chr06: 27729859-27734279 Populus trichocarpa
Potri.006G278500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 27732280-27734279 Populus trichocarpa
Potri.006G278500 2.0kb downstream 2.0kb downstream 4421 true Chr06: 27727859-27732279 Populus trichocarpa
Potri.006G278500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 27727859-27729858 Populus trichocarpa
Potri.006G278500 5.0kb upstream 5.0kb upstream 7421 true Chr06: 27729859-27737279 Populus trichocarpa
Potri.006G278500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 27732280-27737279 Populus trichocarpa
Potri.006G278500 5.0kb downstream 5.0kb downstream 7421 true Chr06: 27724859-27732279 Populus trichocarpa
Potri.006G278500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 27724859-27729858 Populus trichocarpa
Potri.006G278500 10.0kb upstream 10.0kb upstream 12421 true Chr06: 27729859-27742279 Populus trichocarpa
Potri.006G278500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 27732280-27742279 Populus trichocarpa
Potri.006G278500 10.0kb downstream 10.0kb downstream 12421 true Chr06: 27719859-27732279 Populus trichocarpa
Potri.006G278500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 27719859-27729858 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041237 5273 Angiosperm View MSA
122460754 5262 Malpighiales View MSA
124241004 5268 Malvidae View MSA
124065291 5270 Rosid View MSA
123737666 5271 Pentapetalae View MSA
122786404 5272 Eudicot View MSA
121344768 5274 Embryophyte View MSA
123424832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain