Gene : Potri.007G087500 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR11945//PTHR11945:SF200 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  898
Name:  ? Potri.007G087500 Secondary Identifier:  ? PAC:37252112
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G087500 0.5kb upstream 0.5kb upstream 3228 true Chr07: 11354392-11357619 Populus trichocarpa
Potri.007G087500 0.5kb upstream 0.5kb upstream 500 false Chr07: 11354392-11354891 Populus trichocarpa
Potri.007G087500 0.5kb downstream 0.5kb downstream 3228 true Chr07: 11354892-11358119 Populus trichocarpa
Potri.007G087500 0.5kb downstream 0.5kb downstream 500 false Chr07: 11357620-11358119 Populus trichocarpa
Potri.007G087500 1.0kb upstream 1.0kb upstream 3728 true Chr07: 11353892-11357619 Populus trichocarpa
Potri.007G087500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11353892-11354891 Populus trichocarpa
Potri.007G087500 1.0kb downstream 1.0kb downstream 3728 true Chr07: 11354892-11358619 Populus trichocarpa
Potri.007G087500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11357620-11358619 Populus trichocarpa
Potri.007G087500 2.0kb upstream 2.0kb upstream 4728 true Chr07: 11352892-11357619 Populus trichocarpa
Potri.007G087500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11352892-11354891 Populus trichocarpa
Potri.007G087500 2.0kb downstream 2.0kb downstream 4728 true Chr07: 11354892-11359619 Populus trichocarpa
Potri.007G087500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11357620-11359619 Populus trichocarpa
Potri.007G087500 5.0kb upstream 5.0kb upstream 7728 true Chr07: 11349892-11357619 Populus trichocarpa
Potri.007G087500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11349892-11354891 Populus trichocarpa
Potri.007G087500 5.0kb downstream 5.0kb downstream 7728 true Chr07: 11354892-11362619 Populus trichocarpa
Potri.007G087500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11357620-11362619 Populus trichocarpa
Potri.007G087500 10.0kb upstream 10.0kb upstream 12728 true Chr07: 11344892-11357619 Populus trichocarpa
Potri.007G087500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11344892-11354891 Populus trichocarpa
Potri.007G087500 10.0kb downstream 10.0kb downstream 12728 true Chr07: 11354892-11367619 Populus trichocarpa
Potri.007G087500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11357620-11367619 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459786 5262 Malpighiales View MSA
124248545 5268 Malvidae View MSA
124063707 5270 Rosid View MSA
123753647 5271 Pentapetalae View MSA
122786853 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain