Gene : Potri.007G081400 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR32438//PTHR32438:SF5 - FAMILY NOT NAMED // 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  835
Name:  ? Potri.007G081400 Secondary Identifier:  ? PAC:37252764

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6724 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7238 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G081400 0.5kb upstream 0.5kb upstream 7289 true Chr07: 10542508-10549796 Populus trichocarpa
Potri.007G081400 0.5kb upstream 0.5kb upstream 500 false Chr07: 10549297-10549796 Populus trichocarpa
Potri.007G081400 0.5kb downstream 0.5kb downstream 7289 true Chr07: 10542008-10549296 Populus trichocarpa
Potri.007G081400 0.5kb downstream 0.5kb downstream 500 false Chr07: 10542008-10542507 Populus trichocarpa
Potri.007G081400 1.0kb upstream 1.0kb upstream 7789 true Chr07: 10542508-10550296 Populus trichocarpa
Potri.007G081400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 10549297-10550296 Populus trichocarpa
Potri.007G081400 1.0kb downstream 1.0kb downstream 7789 true Chr07: 10541508-10549296 Populus trichocarpa
Potri.007G081400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 10541508-10542507 Populus trichocarpa
Potri.007G081400 2.0kb upstream 2.0kb upstream 8789 true Chr07: 10542508-10551296 Populus trichocarpa
Potri.007G081400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 10549297-10551296 Populus trichocarpa
Potri.007G081400 2.0kb downstream 2.0kb downstream 8789 true Chr07: 10540508-10549296 Populus trichocarpa
Potri.007G081400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 10540508-10542507 Populus trichocarpa
Potri.007G081400 5.0kb upstream 5.0kb upstream 11789 true Chr07: 10542508-10554296 Populus trichocarpa
Potri.007G081400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 10549297-10554296 Populus trichocarpa
Potri.007G081400 5.0kb downstream 5.0kb downstream 11789 true Chr07: 10537508-10549296 Populus trichocarpa
Potri.007G081400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 10537508-10542507 Populus trichocarpa
Potri.007G081400 10.0kb upstream 10.0kb upstream 16789 true Chr07: 10542508-10559296 Populus trichocarpa
Potri.007G081400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 10549297-10559296 Populus trichocarpa
Potri.007G081400 10.0kb downstream 10.0kb downstream 16789 true Chr07: 10532508-10549296 Populus trichocarpa
Potri.007G081400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 10532508-10542507 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450682 5262 Malpighiales View MSA
124246135 5268 Malvidae View MSA
124069427 5270 Rosid View MSA
123741915 5271 Pentapetalae View MSA
122794283 5272 Eudicot View MSA
122048475 5273 Angiosperm View MSA
121348239 5274 Embryophyte View MSA
123427426 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain