Gene : Potri.007G058500 P. trichocarpa v3.1
Defline:  (1 of 6) K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Genomic Order:  599
Name:  ? Potri.007G058500 Secondary Identifier:  ? PAC:37252204
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7560 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G058500 0.5kb upstream 0.5kb upstream 4085 true Chr07: 6282497-6286581 Populus trichocarpa
Potri.007G058500 0.5kb upstream 0.5kb upstream 500 false Chr07: 6282497-6282996 Populus trichocarpa
Potri.007G058500 0.5kb downstream 0.5kb downstream 4085 true Chr07: 6282997-6287081 Populus trichocarpa
Potri.007G058500 0.5kb downstream 0.5kb downstream 500 false Chr07: 6286582-6287081 Populus trichocarpa
Potri.007G058500 1.0kb upstream 1.0kb upstream 4585 true Chr07: 6281997-6286581 Populus trichocarpa
Potri.007G058500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6281997-6282996 Populus trichocarpa
Potri.007G058500 1.0kb downstream 1.0kb downstream 4585 true Chr07: 6282997-6287581 Populus trichocarpa
Potri.007G058500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6286582-6287581 Populus trichocarpa
Potri.007G058500 2.0kb upstream 2.0kb upstream 5585 true Chr07: 6280997-6286581 Populus trichocarpa
Potri.007G058500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6280997-6282996 Populus trichocarpa
Potri.007G058500 2.0kb downstream 2.0kb downstream 5585 true Chr07: 6282997-6288581 Populus trichocarpa
Potri.007G058500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6286582-6288581 Populus trichocarpa
Potri.007G058500 5.0kb upstream 5.0kb upstream 8585 true Chr07: 6277997-6286581 Populus trichocarpa
Potri.007G058500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6277997-6282996 Populus trichocarpa
Potri.007G058500 5.0kb downstream 5.0kb downstream 8585 true Chr07: 6282997-6291581 Populus trichocarpa
Potri.007G058500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6286582-6291581 Populus trichocarpa
Potri.007G058500 10.0kb upstream 10.0kb upstream 13585 true Chr07: 6272997-6286581 Populus trichocarpa
Potri.007G058500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6272997-6282996 Populus trichocarpa
Potri.007G058500 10.0kb downstream 10.0kb downstream 13585 true Chr07: 6282997-6296581 Populus trichocarpa
Potri.007G058500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6286582-6296581 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458394 5262 Malpighiales View MSA
124246155 5268 Malvidae View MSA
124070864 5270 Rosid View MSA
123742318 5271 Pentapetalae View MSA
122794630 5272 Eudicot View MSA
122048955 5273 Angiosperm View MSA
121351194 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain