Gene : Potri.007G050400 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR11945//PTHR11945:SF200 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  519
Name:  ? Potri.007G050400 Secondary Identifier:  ? PAC:37252962
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G050400 0.5kb upstream 0.5kb upstream 2528 true Chr07: 4888846-4891373 Populus trichocarpa
Potri.007G050400 0.5kb upstream 0.5kb upstream 500 false Chr07: 4890874-4891373 Populus trichocarpa
Potri.007G050400 0.5kb downstream 0.5kb downstream 2528 true Chr07: 4888346-4890873 Populus trichocarpa
Potri.007G050400 0.5kb downstream 0.5kb downstream 500 false Chr07: 4888346-4888845 Populus trichocarpa
Potri.007G050400 1.0kb upstream 1.0kb upstream 3028 true Chr07: 4888846-4891873 Populus trichocarpa
Potri.007G050400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4890874-4891873 Populus trichocarpa
Potri.007G050400 1.0kb downstream 1.0kb downstream 3028 true Chr07: 4887846-4890873 Populus trichocarpa
Potri.007G050400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4887846-4888845 Populus trichocarpa
Potri.007G050400 2.0kb upstream 2.0kb upstream 4028 true Chr07: 4888846-4892873 Populus trichocarpa
Potri.007G050400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4890874-4892873 Populus trichocarpa
Potri.007G050400 2.0kb downstream 2.0kb downstream 4028 true Chr07: 4886846-4890873 Populus trichocarpa
Potri.007G050400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4886846-4888845 Populus trichocarpa
Potri.007G050400 5.0kb upstream 5.0kb upstream 7028 true Chr07: 4888846-4895873 Populus trichocarpa
Potri.007G050400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4890874-4895873 Populus trichocarpa
Potri.007G050400 5.0kb downstream 5.0kb downstream 7028 true Chr07: 4883846-4890873 Populus trichocarpa
Potri.007G050400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4883846-4888845 Populus trichocarpa
Potri.007G050400 10.0kb upstream 10.0kb upstream 12028 true Chr07: 4888846-4900873 Populus trichocarpa
Potri.007G050400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4890874-4900873 Populus trichocarpa
Potri.007G050400 10.0kb downstream 10.0kb downstream 12028 true Chr07: 4878846-4890873 Populus trichocarpa
Potri.007G050400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4878846-4888845 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122398677 5262 Malpighiales View MSA
124253684 5268 Malvidae View MSA
124069767 5270 Rosid View MSA
123753647 5271 Pentapetalae View MSA
122786853 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain