Gene : Potri.008G013800 P. trichocarpa v3.1

Defline:  (1 of 3) PTHR11527//PTHR11527:SF131 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED Genomic Order:  141
Name:  ? Potri.008G013800 Secondary Identifier:  ? PAC:37270299

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G013800 0.5kb upstream 0.5kb upstream 2352 true Chr08: 745454-747805 Populus trichocarpa
Potri.008G013800 0.5kb upstream 0.5kb upstream 500 false Chr08: 745454-745953 Populus trichocarpa
Potri.008G013800 0.5kb downstream 0.5kb downstream 2352 true Chr08: 745954-748305 Populus trichocarpa
Potri.008G013800 0.5kb downstream 0.5kb downstream 500 false Chr08: 747806-748305 Populus trichocarpa
Potri.008G013800 1.0kb upstream 1.0kb upstream 2852 true Chr08: 744954-747805 Populus trichocarpa
Potri.008G013800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 744954-745953 Populus trichocarpa
Potri.008G013800 1.0kb downstream 1.0kb downstream 2852 true Chr08: 745954-748805 Populus trichocarpa
Potri.008G013800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 747806-748805 Populus trichocarpa
Potri.008G013800 2.0kb upstream 2.0kb upstream 3852 true Chr08: 743954-747805 Populus trichocarpa
Potri.008G013800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 743954-745953 Populus trichocarpa
Potri.008G013800 2.0kb downstream 2.0kb downstream 3852 true Chr08: 745954-749805 Populus trichocarpa
Potri.008G013800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 747806-749805 Populus trichocarpa
Potri.008G013800 5.0kb upstream 5.0kb upstream 6852 true Chr08: 740954-747805 Populus trichocarpa
Potri.008G013800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 740954-745953 Populus trichocarpa
Potri.008G013800 5.0kb downstream 5.0kb downstream 6852 true Chr08: 745954-752805 Populus trichocarpa
Potri.008G013800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 747806-752805 Populus trichocarpa
Potri.008G013800 10.0kb upstream 10.0kb upstream 11852 true Chr08: 735954-747805 Populus trichocarpa
Potri.008G013800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 735954-745953 Populus trichocarpa
Potri.008G013800 10.0kb downstream 10.0kb downstream 11852 true Chr08: 745954-757805 Populus trichocarpa
Potri.008G013800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 747806-757805 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456691 5262 Malpighiales View MSA
124238801 5268 Malvidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain