Gene : Potri.007G142300 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR30239:SF3 - ACETOLACTATE SYNTHASE SMALL SUBUNIT 2, CHLOROPLASTIC Genomic Order:  1463
Name:  ? Potri.007G142300 Secondary Identifier:  ? PAC:37251391
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa BRANCHED-CHAIN-AA-SYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ILEUSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  
Ptrichocarpa VALSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G142300 0.5kb upstream 0.5kb upstream 5682 true Chr07: 15230318-15235999 Populus trichocarpa
Potri.007G142300 0.5kb upstream 0.5kb upstream 500 false Chr07: 15230318-15230817 Populus trichocarpa
Potri.007G142300 0.5kb downstream 0.5kb downstream 5682 true Chr07: 15230818-15236499 Populus trichocarpa
Potri.007G142300 0.5kb downstream 0.5kb downstream 500 false Chr07: 15236000-15236499 Populus trichocarpa
Potri.007G142300 1.0kb upstream 1.0kb upstream 6182 true Chr07: 15229818-15235999 Populus trichocarpa
Potri.007G142300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15229818-15230817 Populus trichocarpa
Potri.007G142300 1.0kb downstream 1.0kb downstream 6182 true Chr07: 15230818-15236999 Populus trichocarpa
Potri.007G142300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15236000-15236999 Populus trichocarpa
Potri.007G142300 2.0kb upstream 2.0kb upstream 7182 true Chr07: 15228818-15235999 Populus trichocarpa
Potri.007G142300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15228818-15230817 Populus trichocarpa
Potri.007G142300 2.0kb downstream 2.0kb downstream 7182 true Chr07: 15230818-15237999 Populus trichocarpa
Potri.007G142300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15236000-15237999 Populus trichocarpa
Potri.007G142300 5.0kb upstream 5.0kb upstream 10182 true Chr07: 15225818-15235999 Populus trichocarpa
Potri.007G142300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15225818-15230817 Populus trichocarpa
Potri.007G142300 5.0kb downstream 5.0kb downstream 10182 true Chr07: 15230818-15240999 Populus trichocarpa
Potri.007G142300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15236000-15240999 Populus trichocarpa
Potri.007G142300 10.0kb upstream 10.0kb upstream 15182 true Chr07: 15220818-15235999 Populus trichocarpa
Potri.007G142300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15220818-15230817 Populus trichocarpa
Potri.007G142300 10.0kb downstream 10.0kb downstream 15182 true Chr07: 15230818-15245999 Populus trichocarpa
Potri.007G142300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15236000-15245999 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
122462207 5262 Malpighiales View MSA
124249637 5268 Malvidae View MSA
124071957 5270 Rosid View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain