Gene : Potri.007G126400 P. trichocarpa v3.1

Defline:  (1 of 2) K01012 - biotin synthase (bioB) Genomic Order:  1302
Name:  ? Potri.007G126400 Secondary Identifier:  ? PAC:37253343

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY0-1507 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G126400 0.5kb upstream 0.5kb upstream 4447 true Chr07: 14251678-14256124 Populus trichocarpa
Potri.007G126400 0.5kb upstream 0.5kb upstream 500 false Chr07: 14251678-14252177 Populus trichocarpa
Potri.007G126400 0.5kb downstream 0.5kb downstream 4447 true Chr07: 14252178-14256624 Populus trichocarpa
Potri.007G126400 0.5kb downstream 0.5kb downstream 500 false Chr07: 14256125-14256624 Populus trichocarpa
Potri.007G126400 1.0kb upstream 1.0kb upstream 4947 true Chr07: 14251178-14256124 Populus trichocarpa
Potri.007G126400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 14251178-14252177 Populus trichocarpa
Potri.007G126400 1.0kb downstream 1.0kb downstream 4947 true Chr07: 14252178-14257124 Populus trichocarpa
Potri.007G126400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 14256125-14257124 Populus trichocarpa
Potri.007G126400 2.0kb upstream 2.0kb upstream 5947 true Chr07: 14250178-14256124 Populus trichocarpa
Potri.007G126400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 14250178-14252177 Populus trichocarpa
Potri.007G126400 2.0kb downstream 2.0kb downstream 5947 true Chr07: 14252178-14258124 Populus trichocarpa
Potri.007G126400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 14256125-14258124 Populus trichocarpa
Potri.007G126400 5.0kb upstream 5.0kb upstream 8947 true Chr07: 14247178-14256124 Populus trichocarpa
Potri.007G126400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 14247178-14252177 Populus trichocarpa
Potri.007G126400 5.0kb downstream 5.0kb downstream 8947 true Chr07: 14252178-14261124 Populus trichocarpa
Potri.007G126400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 14256125-14261124 Populus trichocarpa
Potri.007G126400 10.0kb upstream 10.0kb upstream 13947 true Chr07: 14242178-14256124 Populus trichocarpa
Potri.007G126400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 14242178-14252177 Populus trichocarpa
Potri.007G126400 10.0kb downstream 10.0kb downstream 13947 true Chr07: 14252178-14266124 Populus trichocarpa
Potri.007G126400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 14256125-14266124 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456228 5262 Malpighiales View MSA
124240985 5268 Malvidae View MSA
124069050 5270 Rosid View MSA
123738436 5271 Pentapetalae View MSA
122791352 5272 Eudicot View MSA
122044097 5273 Angiosperm View MSA
121346101 5274 Embryophyte View MSA
123424620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain