Gene : Potri.007G122100 P. trichocarpa v3.1

Defline:  (1 of 5) PTHR31235:SF39 - PEROXIDASE 3-RELATED Genomic Order:  1260
Name:  ? Potri.007G122100 Secondary Identifier:  ? PAC:37252325

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7214 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7445 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G122100 0.5kb upstream 0.5kb upstream 2340 true Chr07: 14042329-14044668 Populus trichocarpa
Potri.007G122100 0.5kb upstream 0.5kb upstream 500 false Chr07: 14044169-14044668 Populus trichocarpa
Potri.007G122100 0.5kb downstream 0.5kb downstream 2340 true Chr07: 14041829-14044168 Populus trichocarpa
Potri.007G122100 0.5kb downstream 0.5kb downstream 500 false Chr07: 14041829-14042328 Populus trichocarpa
Potri.007G122100 1.0kb upstream 1.0kb upstream 2840 true Chr07: 14042329-14045168 Populus trichocarpa
Potri.007G122100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 14044169-14045168 Populus trichocarpa
Potri.007G122100 1.0kb downstream 1.0kb downstream 2840 true Chr07: 14041329-14044168 Populus trichocarpa
Potri.007G122100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 14041329-14042328 Populus trichocarpa
Potri.007G122100 2.0kb upstream 2.0kb upstream 3840 true Chr07: 14042329-14046168 Populus trichocarpa
Potri.007G122100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 14044169-14046168 Populus trichocarpa
Potri.007G122100 2.0kb downstream 2.0kb downstream 3840 true Chr07: 14040329-14044168 Populus trichocarpa
Potri.007G122100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 14040329-14042328 Populus trichocarpa
Potri.007G122100 5.0kb upstream 5.0kb upstream 6840 true Chr07: 14042329-14049168 Populus trichocarpa
Potri.007G122100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 14044169-14049168 Populus trichocarpa
Potri.007G122100 5.0kb downstream 5.0kb downstream 6840 true Chr07: 14037329-14044168 Populus trichocarpa
Potri.007G122100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 14037329-14042328 Populus trichocarpa
Potri.007G122100 10.0kb upstream 10.0kb upstream 11840 true Chr07: 14042329-14054168 Populus trichocarpa
Potri.007G122100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 14044169-14054168 Populus trichocarpa
Potri.007G122100 10.0kb downstream 10.0kb downstream 11840 true Chr07: 14032329-14044168 Populus trichocarpa
Potri.007G122100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 14032329-14042328 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459695 5262 Malpighiales View MSA
124250593 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain