Gene : Potri.007G112600 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Genomic Order:  1159
Name:  ? Potri.007G112600 Secondary Identifier:  ? PAC:37252926
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.007G112600 0.5kb upstream 0.5kb upstream 4260 true Chr07: 13493949-13498208 Populus trichocarpa
Potri.007G112600 0.5kb upstream 0.5kb upstream 500 false Chr07: 13493949-13494448 Populus trichocarpa
Potri.007G112600 0.5kb downstream 0.5kb downstream 4260 true Chr07: 13494449-13498708 Populus trichocarpa
Potri.007G112600 0.5kb downstream 0.5kb downstream 500 false Chr07: 13498209-13498708 Populus trichocarpa
Potri.007G112600 1.0kb upstream 1.0kb upstream 4760 true Chr07: 13493449-13498208 Populus trichocarpa
Potri.007G112600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 13493449-13494448 Populus trichocarpa
Potri.007G112600 1.0kb downstream 1.0kb downstream 4760 true Chr07: 13494449-13499208 Populus trichocarpa
Potri.007G112600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 13498209-13499208 Populus trichocarpa
Potri.007G112600 2.0kb upstream 2.0kb upstream 5760 true Chr07: 13492449-13498208 Populus trichocarpa
Potri.007G112600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 13492449-13494448 Populus trichocarpa
Potri.007G112600 2.0kb downstream 2.0kb downstream 5760 true Chr07: 13494449-13500208 Populus trichocarpa
Potri.007G112600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 13498209-13500208 Populus trichocarpa
Potri.007G112600 5.0kb upstream 5.0kb upstream 8760 true Chr07: 13489449-13498208 Populus trichocarpa
Potri.007G112600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 13489449-13494448 Populus trichocarpa
Potri.007G112600 5.0kb downstream 5.0kb downstream 8760 true Chr07: 13494449-13503208 Populus trichocarpa
Potri.007G112600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 13498209-13503208 Populus trichocarpa
Potri.007G112600 10.0kb upstream 10.0kb upstream 13760 true Chr07: 13484449-13498208 Populus trichocarpa
Potri.007G112600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 13484449-13494448 Populus trichocarpa
Potri.007G112600 10.0kb downstream 10.0kb downstream 13760 true Chr07: 13494449-13508208 Populus trichocarpa
Potri.007G112600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 13498209-13508208 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449311 5262 Malpighiales View MSA
124247205 5268 Malvidae View MSA
124063481 5270 Rosid View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain