Gene : Potri.008G066500 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31412:SF5 - ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED Genomic Order:  687
Name:  ? Potri.008G066500 Secondary Identifier:  ? PAC:37270274
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G066500 0.5kb upstream 0.5kb upstream 5244 true Chr08: 4044364-4049607 Populus trichocarpa
Potri.008G066500 0.5kb upstream 0.5kb upstream 500 false Chr08: 4044364-4044863 Populus trichocarpa
Potri.008G066500 0.5kb downstream 0.5kb downstream 5244 true Chr08: 4044864-4050107 Populus trichocarpa
Potri.008G066500 0.5kb downstream 0.5kb downstream 500 false Chr08: 4049608-4050107 Populus trichocarpa
Potri.008G066500 1.0kb upstream 1.0kb upstream 5744 true Chr08: 4043864-4049607 Populus trichocarpa
Potri.008G066500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4043864-4044863 Populus trichocarpa
Potri.008G066500 1.0kb downstream 1.0kb downstream 5744 true Chr08: 4044864-4050607 Populus trichocarpa
Potri.008G066500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4049608-4050607 Populus trichocarpa
Potri.008G066500 2.0kb upstream 2.0kb upstream 6744 true Chr08: 4042864-4049607 Populus trichocarpa
Potri.008G066500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4042864-4044863 Populus trichocarpa
Potri.008G066500 2.0kb downstream 2.0kb downstream 6744 true Chr08: 4044864-4051607 Populus trichocarpa
Potri.008G066500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4049608-4051607 Populus trichocarpa
Potri.008G066500 5.0kb upstream 5.0kb upstream 9744 true Chr08: 4039864-4049607 Populus trichocarpa
Potri.008G066500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4039864-4044863 Populus trichocarpa
Potri.008G066500 5.0kb downstream 5.0kb downstream 9744 true Chr08: 4044864-4054607 Populus trichocarpa
Potri.008G066500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4049608-4054607 Populus trichocarpa
Potri.008G066500 10.0kb upstream 10.0kb upstream 14744 true Chr08: 4034864-4049607 Populus trichocarpa
Potri.008G066500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4034864-4044863 Populus trichocarpa
Potri.008G066500 10.0kb downstream 10.0kb downstream 14744 true Chr08: 4044864-4059607 Populus trichocarpa
Potri.008G066500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4049608-4059607 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458767 5262 Malpighiales View MSA
124242686 5268 Malvidae View MSA
124061333 5270 Rosid View MSA
123739814 5271 Pentapetalae View MSA
122788407 5272 Eudicot View MSA
122044367 5273 Angiosperm View MSA
121345535 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain