Gene : Potri.008G055400 P. trichocarpa v3.1

Defline:  (1 of 2) 1.3.1.38//1.3.1.93 - Trans-2-enoyl-CoA reductase (NADPH) // Very-long-chain enoyl-CoA reductase Genomic Order:  574
Name:  ? Potri.008G055400 Secondary Identifier:  ? PAC:37270693

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5080 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6433 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6598 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-389 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7036 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7601 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7606 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7619 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7726 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.008G055400 0.5kb upstream 0.5kb upstream 3809 true Chr08: 3280434-3284242 Populus trichocarpa
Potri.008G055400 0.5kb upstream 0.5kb upstream 500 false Chr08: 3280434-3280933 Populus trichocarpa
Potri.008G055400 0.5kb downstream 0.5kb downstream 3809 true Chr08: 3280934-3284742 Populus trichocarpa
Potri.008G055400 0.5kb downstream 0.5kb downstream 500 false Chr08: 3284243-3284742 Populus trichocarpa
Potri.008G055400 1.0kb upstream 1.0kb upstream 4309 true Chr08: 3279934-3284242 Populus trichocarpa
Potri.008G055400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3279934-3280933 Populus trichocarpa
Potri.008G055400 1.0kb downstream 1.0kb downstream 4309 true Chr08: 3280934-3285242 Populus trichocarpa
Potri.008G055400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3284243-3285242 Populus trichocarpa
Potri.008G055400 2.0kb upstream 2.0kb upstream 5309 true Chr08: 3278934-3284242 Populus trichocarpa
Potri.008G055400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3278934-3280933 Populus trichocarpa
Potri.008G055400 2.0kb downstream 2.0kb downstream 5309 true Chr08: 3280934-3286242 Populus trichocarpa
Potri.008G055400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3284243-3286242 Populus trichocarpa
Potri.008G055400 5.0kb upstream 5.0kb upstream 8309 true Chr08: 3275934-3284242 Populus trichocarpa
Potri.008G055400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3275934-3280933 Populus trichocarpa
Potri.008G055400 5.0kb downstream 5.0kb downstream 8309 true Chr08: 3280934-3289242 Populus trichocarpa
Potri.008G055400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3284243-3289242 Populus trichocarpa
Potri.008G055400 10.0kb upstream 10.0kb upstream 13309 true Chr08: 3270934-3284242 Populus trichocarpa
Potri.008G055400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3270934-3280933 Populus trichocarpa
Potri.008G055400 10.0kb downstream 10.0kb downstream 13309 true Chr08: 3280934-3294242 Populus trichocarpa
Potri.008G055400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3284243-3294242 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453079 5262 Malpighiales View MSA
124241382 5268 Malvidae View MSA
124066055 5270 Rosid View MSA
123738420 5271 Pentapetalae View MSA
122787535 5272 Eudicot View MSA
122041851 5273 Angiosperm View MSA
121344061 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain